diff --git a/hi-ml-cpath/environment.yml b/hi-ml-cpath/environment.yml index 93d7a3bc5..ac77503eb 100644 --- a/hi-ml-cpath/environment.yml +++ b/hi-ml-cpath/environment.yml @@ -15,7 +15,8 @@ dependencies: - certifi=2022.9.24=py39h06a4308_0 - cudatoolkit=11.3.1=h2bc3f7f_2 - ffmpeg=4.2.2=h20bf706_0 - - fontconfig=2.13.1=hef1e5e3_1 + - flit-core=3.6.0=pyhd3eb1b0_0 + - fontconfig=2.14.1=hef1e5e3_0 - freetype=2.12.1=h4a9f257_0 - gdk-pixbuf=2.42.6=h04a7f16_0 - gettext=0.21.0=hf68c758_0 @@ -43,7 +44,6 @@ dependencies: - libtasn1=4.16.0=h27cfd23_0 - libtiff=4.4.0=hecacb30_2 - libunistring=0.9.10=h27cfd23_0 - - libuuid=1.41.5=h5eee18b_0 - libuv=1.40.0=h7b6447c_0 - libvpx=1.7.0=h439df22_0 - libwebp=1.2.4=h11a3e52_0 @@ -74,10 +74,10 @@ dependencies: - sqlite=3.40.0=h5082296_0 - tk=8.6.12=h1ccaba5_0 - torchvision=0.11.1=py39_cu113 - - typing_extensions=4.3.0=py39h06a4308_0 + - typing_extensions=4.4.0=py39h06a4308_0 - tzdata=2022f=h04d1e81_0 - x264=1!157.20191217=h7b6447c_0 - - xz=5.2.6=h5eee18b_0 + - xz=5.2.8=h5eee18b_0 - zlib=1.2.13=h5eee18b_0 - zstd=1.5.2=ha4553b6_0 - pip: @@ -111,7 +111,7 @@ dependencies: - azureml-dataprep-native==38.0.0 - azureml-dataprep-rslex==2.11.4 - azureml-dataset-runtime==1.47.0 - - azureml-mlflow==1.47.0 + - azureml-mlflow==1.48.0 - azureml-telemetry==1.47.0 - azureml-tensorboard==1.47.0 - azureml-train-core==1.47.0 @@ -146,7 +146,8 @@ dependencies: - docutils==0.16 - dotnetcore2==3.1.23 - entrypoints==0.4 - - filelock==3.8.0 + - filelock==3.8.1 + - fire==0.4.0 - flake8==4.0.1 - flask==2.2.2 - frozenlist==1.3.3 @@ -155,7 +156,7 @@ dependencies: - girder-client==3.1.14 - gitdb==4.0.10 - gitpython==3.1.29 - - google-api-core==2.10.2 + - google-api-core==2.11.0 - google-auth==1.35.0 - google-auth-oauthlib==0.4.6 - googleapis-common-protos==1.57.0 @@ -183,9 +184,10 @@ dependencies: - jsonschema==4.17.3 - keyring==23.11.0 - kiwisolver==1.4.4 - - knack==0.10.0 + - knack==0.10.1 - lazy-object-proxy==1.8.0 - lightning-bolts==0.4.0 + - lightning-utilities==0.3.0 - llvmlite==0.39.1 - lxml==4.9.1 - mako==1.2.4 @@ -205,7 +207,7 @@ dependencies: - msal-extensions==0.3.1 - msrest==0.7.1 - msrestazure==0.6.4 - - multidict==6.0.2 + - multidict==6.0.3 - mypy==0.961 - mypy-extensions==0.4.3 - myst-parser==0.15.2 @@ -240,8 +242,7 @@ dependencies: - pycobertura==2.0.1 - pycodestyle==2.8.0 - pycparser==2.21 - - pydash==5.1.1 - - pydeprecate==0.3.2 + - pydash==5.1.2 - pydicom==2.3.0 - pyflakes==2.4.0 - pygments==2.13.0 @@ -258,7 +259,7 @@ dependencies: - pytest-rerunfailures==10.2 - pytest-timeout==2.0.1 - python-dateutil==2.8.2 - - pytorch-lightning==1.6.5 + - pytorch-lightning==1.8.3.post1 - pytz==2022.6 - pywavelets==1.4.1 - pyyaml==6.0 @@ -300,6 +301,8 @@ dependencies: - tensorboard==2.6.0 - tensorboard-data-server==0.6.1 - tensorboard-plugin-wit==1.8.1 + - tensorboardx==2.5.1 + - termcolor==2.1.1 - threadpoolctl==3.1.0 - tifffile==2022.10.10 - toml==0.10.2 @@ -318,5 +321,5 @@ dependencies: - wheel==0.36.2 - wrapt==1.14.1 - yacs==0.1.8 - - yarl==1.8.1 + - yarl==1.8.2 - zipp==3.11.0 diff --git a/hi-ml-cpath/primary_deps.yml b/hi-ml-cpath/primary_deps.yml index 853e52619..4074b21c6 100644 --- a/hi-ml-cpath/primary_deps.yml +++ b/hi-ml-cpath/primary_deps.yml @@ -20,7 +20,7 @@ dependencies: - pandas==1.3.4 - pre-commit==2.19.0 - protobuf==3.20.1 - - pytorch-lightning>=1.6.0, <1.7 + - pytorch-lightning>=1.8.0, <1.9 - rpdb==0.1.6 - setuptools==59.5.0 # Run requirements for hi-ml-azure diff --git a/hi-ml/run_requirements.txt b/hi-ml/run_requirements.txt index 0dfe712ab..5384a14cc 100644 --- a/hi-ml/run_requirements.txt +++ b/hi-ml/run_requirements.txt @@ -6,7 +6,7 @@ opencv-python-headless>=4.5.1.48 pandas>=1.3.4 pillow==9.3.0 protobuf<4.0 -pytorch-lightning>=1.6.0, <1.7 +pytorch-lightning>=1.8.0, <1.9 rpdb>=0.1.6 torchvision>=0.10.0 torch>=1.9.0