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<title>Sun Lab | Publications</title>
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<li><a href="members.html">Lab Members</a></li>
<li><a href="publications.html">Publications</a></li>
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<!-- Main Content -->
<div class="content">
<h1>Publications</h1>
<!-- Primary Publications Section -->
<h2>Selected Publications (First or co-first author papers)</h2>
<ul>
<li><strong>Sun, Na*</strong>, Victor, Matheus B.*, Park, Yongjin P., Xiong, Xushen, Scannail, Aine Ni, Leary, Noelle, Prosper, Shaniah, Viswanathan, Soujanya, Luna, Xochitl, Boix, Carles A., et al. (2023). <em>Human microglial state dynamics in Alzheimer’s disease progression</em>. <b>Cell</b>, 186(20), 4386-4403. Published by Elsevier.</li>
<li><strong>Sun, Na</strong>, Akay, Leyla Anne, Murdock, Mitchell H., Park, Yongjin, Galiana-Melendez, Fabiola, Bubnys, Adele, Galani, Kyriaki, Mathys, Hansruedi, Jiang, Xueqiao, Ng, Ayesha P., et al. (2023). <em>Single-nucleus multiregion transcriptomic analysis of brain vasculature in Alzheimer’s disease</em>. <b>Nature Neuroscience</b>, 26(6), 970-982. Published by Nature Publishing Group US, New York.</li>
<li>Garcia, Francisco J.*, <strong>Sun, Na*</strong>, Lee, Hyeseung, Godlewski, Brianna, Mathys, Hansruedi, Galani, Kyriaki, Zhou, Blake, Jiang, Xueqiao, Ng, Ayesha P., Mantero, Julio, et al. (2022). <em>Single-cell dissection of the human brain vasculature</em>. <b>Nature</b>, 603(7903), 893-899. Published by Nature Publishing Group UK, London.</li>
<li><strong>Sun, Na</strong>, Kellis, Manolis. (2022). <em>Immune genes outside immune cells for multiple sclerosis</em>. <b>Neuron</b>, 110(7), 1090-1092. Published by Elsevier.</li>
<li><strong>Sun, Na*</strong>, Yu, Xiaoming*, Li, Fang*, Liu, Denghui, Suo, Shengbao, Chen, Weiyang, Chen, Shirui, Song, Lu, Green, Christopher D., McDermott, Joseph, et al. (2017). <em>Inference of differentiation time for single cell transcriptomes using cell population reference data</em>. <b>Nature Communications</b>, 8(1), 1856. Published by Nature Publishing Group UK, London.</li>
<li>Chen, Di*, <strong>Sun, Na*</strong>, Hou, Lei*, Kim, Rachel, Faith, Jared, Aslanyan, Marianna, Tao, Yu, Zheng, Yi, Fu, Jianping, Liu, Wanlu, et al. (2019). <em>Human primordial germ cells are specified from lineage-primed progenitors</em>. <b>Cell Reports</b>, 29(13), 4568-4582. Published by Elsevier.</li>
<li>Mahajan, Vinay S.*, Mattoo, Hamid*, <strong>Sun, Na*</strong>, Viswanadham, Vinayak*, Yuen, Grace J., Allard-Chamard, Hugues, Ahmad, Maimuna, Murphy, Samuel JH., Cariappa, Annaiah, Tuncay, Yesim, et al. (2021). <em>B1a and B2 cells are characterized by distinct CpG modification states at DNMT3A-maintained enhancers</em>. <b>Nature Communications</b>, 12(1), 2208. Published by Nature Publishing Group UK, London.</li>
</ul>
<!-- Other Publications Section -->
<h2>Other Publications</h2>
<ul>
<li>Murdock, Mitchell H., Yang, Cheng-Yi, <strong>Sun, Na</strong>, Pao, Ping-Chieh, Blanco-Duque, Cristina, Kahn, Martin C., Kim, TaeHyun, Lavoie, Nicolas S., Victor, Matheus B., Islam, Md Rezaul, et al. (2024). <em>Multisensory gamma stimulation promotes glymphatic clearance of amyloid</em>. <b>Nature</b>, 627(8002), 149-156. Published by Nature Publishing Group UK, London.</li>
<li>Zhang, Aixin, Jin, Lei, Yao, Shenqin, Matsuyama, Makoto, van Velthoven, Cindy TJ, Sullivan, Heather Anne, <strong>Sun, Na</strong>, Kellis, Manolis, Tasic, Bosiljka, Wickersham, Ian, et al. (2024). <em>Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing</em>. <b>eLife</b>, 12, RP87866. Published by eLife Sciences Publications Limited.</li>
<li>Allard-Chamard, Hugues, Kaneko, Naoki, Bertocchi, Alice, <strong>Sun, Na</strong>, Boucau, Julie, Kuo, Hsiao-Hsuan, Farmer, Jocelyn R., Perugino, Cory, Mahajan, Vinay S., Murphy, Samuel JH, et al. (2023). <em>Extrafollicular IgD- CD27- CXCR5- CD11c- DN3 B cells infiltrate inflamed tissues in autoimmune fibrosis and in severe COVID-19</em>. <b>Cell Reports</b>, 42(6). Published by Elsevier.</li>
<li>Tanigawa, Yosuke, <strong>Sun, Na</strong>, Li, William F., Boix, Carles A., Galani, Kyriaki, Mathys, Hansruedi, Bennett, David A A., Tsai, Li-Huei, Kellis, Manolis. (2023). <em>Multi-polygenic score model informs the genetic basis of heterogeneity in Alzheimer’s disease</em>. <b>Alzheimer's & Dementia</b>, 19, e079231.</li>
<li>Hou, Lei, Xiong, Xushen, Park, Yongjin, Boix, Carles, James, Benjamin, <strong>Sun, Na</strong>, He, Liang, Patel, Aman, Zhang, Zhizhuo, Molinie, Benoit, et al. (2023). <em>Multitissue H3K27ac profiling of GTEx samples links epigenomic variation to disease</em>. <b>Nature Genetics</b>, 55(10), 1665-1676. Published by Nature Publishing Group US, New York.</li>
<li>Xiong, Xushen, James, Benjamin T., Boix, Carles A., Park, Yongjin P., Galani, Kyriaki, Victor, Matheus B., <strong>Sun, Na</strong>, Hou, Lei, Ho, Li-Lun, Mantero, Julio, et al. (2023). <em>Epigenomic dissection of Alzheimer’s disease pinpoints causal variants and reveals epigenome erosion</em>. <b>Cell</b>, 186(20), 4422-4437. Published by Elsevier.</li>
<li>Wu, Chenwei, Yang, Xiyu, Gilkes, Emil Ghitman, Cui, Hanwen, Choi, Jiheon, <strong>Sun, Na</strong>, Liao, Ziqian, Fan, Bo, Santillana, Mauricio, Celi, Leo, et al. (2023). <em>De-identification and Obfuscation of Gender Attributes from Retinal Scans</em>. In Workshop on Clinical Image-Based Procedures, Springer, pp. 91-101.</li>
<li>Della-Torre, Emanuel, Rigamonti, Elena, Perugino, Cory, Baghai-Sain, Simona, <strong>Sun, Na</strong>, Kaneko, Naoki, Maehara, Takashi, Rovati, Lucrezia, Ponzoni, Maurilio, Milani, Raffaella, et al. (2020). <em>B lymphocytes directly contribute to tissue fibrosis in patients with IgG4-related disease</em>. <b>Journal of Allergy and Clinical Immunology</b>, 145(3), 968-981. Published by Mosby.</li>
<li>Farmer, Jocelyn R., Allard-Chamard, Hugues, <strong>Sun, Na</strong>, Ahmad, Maimuna, Bertocchi, Alice, Mahajan, Vinay S., Aicher, Toby, Arnold, Johan, Benson, Mark D., Morningstar, Jordan, et al. (2019). <em>Induction of metabolic quiescence defines the transitional to follicular B cell switch</em>. <b>Science Signaling</b>, 12(604), eaaw5573. Published by American Association for the Advancement of Science.</li>
<li>Cheng, Hao, Xuan, Hongwen, Green, Christopher D., Han, Yixing, <strong>Sun, Na</strong>, Shen, Hongjie, McDermott, Joseph, Bennett, David A., Lan, Fei, Han, Jing-Dong J. (2018). <em>Repression of human and mouse brain inflammaging transcriptome by broad gene-body histone hyperacetylation</em>. <b>Proceedings of the National Academy of Sciences</b>, 115(29), 7611-7616. Published by National Academy of Sciences.</li>
<li>Xu, Chi, Ai, Daosheng, Shi, Dawei, Suo, Shengbao, Chen, Xingwei, Yan, Yizhen, Cao, Yaqiang, Zhang, Rui, <strong>Sun, Na</strong>, Chen, Weizhong, et al. (2018). <em>Accurate drug repositioning through non-tissue-specific core signatures from cancer transcriptomes</em>. <b>Cell Reports</b>, 25(2), 523-535. Published by Elsevier.</li>
</ul>
<!-- Complete Publication List -->
<p>For a complete list of publications, please visit my <a href="https://scholar.google.com/citations?user=oOxS8vwAAAAJ&hl=en" target="_blank">Google Scholar profile</a>.</p>
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