Skip to content

fc_nblast can be very slow #8

@jefferis

Description

@jefferis

primarily due to reverse scores. But for some reason it seems to me that this can be much worse than using bigmat,

I just had an example with rstudio where it took a minute to do 1 x 3677 normalised scores. My suspicion is that it was actually some unrelated problem e.g. GUI update that was interleaved. These kind of error messages are typical when changing location with an X session in progress:

Tue Mar 18 14:32:29 mac1041-14.lmb.internal rsession[355] <Error>: kCGErrorIllegalArgument: CGSGetDisplayBounds (display 3f003d)

However, there is a still a more general speed issue to be tracked down since I have seen a behaviour where attaching an ff matrix to the global environment can bring access speed benefits.

Metadata

Metadata

Assignees

No one assigned

    Labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions