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[pre-commit.ci] auto fixes from pre-commit.com hooks
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R/dataset.R

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@@ -151,8 +151,6 @@ generate_summarized_experiment <- function(annotation, count_matrix, tpm_matrix,
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}
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#' Build \link[SummarizedExperiment]{SummarizedExperiment} using local annotation and count matrix R objects
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#'
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#' @param annotation (mandatory) dataframe; needs columns 'ID' and 'cell_type'; 'ID' needs to be equal with cell_names in count_matrix

R/simulator.R

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@@ -837,7 +837,6 @@ merge_simulations <- function(simulation_list) {
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#' Create scaling vector from custom or pre-defined scaling factor
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#'
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#' @param data dataset

tests/testthat/test_simulator.R

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@@ -76,8 +76,6 @@ test_that("test different scaling factor calculations + mRNA bias removal from c
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test_that("test census", {
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tpm <- Matrix::Matrix(matrix(rpois(3e5, 5), ncol = 300), sparse = TRUE)
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tpm <- Matrix::t(1e6 * Matrix::t(tpm) / Matrix::colSums(tpm))

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