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Merge branch 'migration' into estimation-procedures-mig
2 parents f33e962 + 44b48b5 commit 2bfbb34

32 files changed

Lines changed: 607 additions & 464 deletions

.github/workflows/test.yml

Lines changed: 74 additions & 29 deletions
Original file line numberDiff line numberDiff line change
@@ -34,15 +34,27 @@ jobs:
3434
sklearn-only: ["true"]
3535

3636
exclude:
37-
# incompatible version combinations
37+
# (python, sklearn) combinations for which there is no PyPI release
38+
# scikit-learn 1.3
3839
- python-version: "3.13"
3940
scikit-learn: "1.3.*"
40-
- python-version: "3.13"
41-
scikit-learn: "1.4.*"
4241
- python-version: "3.14"
4342
scikit-learn: "1.3.*"
43+
# scikit-learn 1.4
44+
- python-version: "3.13"
45+
scikit-learn: "1.4.*"
4446
- python-version: "3.14"
4547
scikit-learn: "1.4.*"
48+
# scikit-learn 1.5
49+
- python-version: "3.14"
50+
scikit-learn: "1.5.*"
51+
# scikit-learn 1.6
52+
- python-version: "3.14"
53+
scikit-learn: "1.6.*"
54+
# scikit-learn 1.7 is installed with pandas 3
55+
- python-version: "3.10"
56+
scikit-learn: "1.7.*"
57+
4658

4759
include:
4860
# Full test run on ubuntu, 3.14
@@ -64,14 +76,6 @@ jobs:
6476
sklearn-only: "false"
6577
code-cov: true
6678

67-
# Pandas 2 run
68-
- os: ubuntu-latest
69-
python-version: "3.12"
70-
scikit-learn: "1.5.*"
71-
sklearn-only: "false"
72-
pandas-version: "2.*"
73-
code-cov: false
74-
7579
steps:
7680
- uses: actions/checkout@v6
7781
with:
@@ -82,15 +86,21 @@ jobs:
8286
with:
8387
python-version: ${{ matrix.python-version }}
8488

85-
- name: Install test dependencies, scikit-learn, and optional pandas
89+
- name: Install test dependencies, scikit-learn, and pandas
8690
shell: bash
8791
run: |
8892
python -m pip install --upgrade pip
8993
pip install -e .[test] scikit-learn==${{ matrix.scikit-learn }}
90-
91-
if [ "${{ matrix.pandas-version }}" != "" ]; then
92-
echo "Installing specific pandas version: ${{ matrix.pandas-version }}"
93-
pip install "pandas==${{ matrix.pandas-version }}"
94+
95+
# scikit-learn 1.7+ requires pandas 3.x, earlier versions use pandas 2.x
96+
version="${{ matrix.scikit-learn }}"
97+
major=$(echo "$version" | cut -d. -f1)
98+
minor=$(echo "$version" | cut -d. -f2)
99+
100+
if [[ "$major" -gt 1 ]] || { [[ "$major" -eq 1 ]] && [[ "$minor" -ge 7 ]]; }; then
101+
pip install "pandas==3.*"
102+
else
103+
pip install "pandas==2.*"
94104
fi
95105
96106
- name: Store repository status
@@ -101,22 +111,46 @@ jobs:
101111
echo "BEFORE=$git_status" >> $GITHUB_ENV
102112
echo "Repository status before tests: $git_status"
103113
114+
- name: Clone Services
115+
if: matrix.os == 'ubuntu-latest'
116+
id: clone-services
117+
run: |
118+
git clone --depth 1 https://github.com/openml/services.git
119+
120+
- name: Start Docker Services
121+
id: start-services
122+
if: matrix.os == 'ubuntu-latest'
123+
working-directory: ./services
124+
run: |
125+
chmod -R a+rw ./data
126+
chmod -R a+rw ./logs
127+
docker compose --profile rest-api --profile minio --profile evaluation-engine up -d
128+
129+
echo "Waiting for PHP API to boot..."
130+
timeout 60s bash -c 'until [ "$(docker inspect -f {{.State.Health.Status}} openml-php-rest-api)" == "healthy" ]; do sleep 5; done'
131+
132+
echo "Final Verification: Gateway Connectivity..."
133+
curl -sSfL http://localhost:8000/api/v1/xml/data/1 | head -n 15
134+
135+
docker container ls
136+
104137
- name: Show installed dependencies
105138
run: python -m pip list
106139

107140
- name: Run tests on Ubuntu Test
108141
if: matrix.os == 'ubuntu-latest'
109142
env:
110143
OPENML_TEST_SERVER_ADMIN_KEY: ${{ secrets.OPENML_TEST_SERVER_ADMIN_KEY }}
144+
OPENML_USE_LOCAL_SERVICES: "true"
111145
run: |
112146
if [ "${{ matrix.code-cov }}" = "true" ]; then
113147
codecov="--cov=openml --long --cov-report=xml"
114148
fi
115149
116150
if [ "${{ matrix.sklearn-only }}" = "true" ]; then
117-
marks="sklearn and not production_server and not test_server"
151+
marks="sklearn and not production_server"
118152
else
119-
marks="not production_server and not test_server"
153+
marks="not production_server"
120154
fi
121155
122156
pytest -n 4 --durations=20 --dist load -sv $codecov -o log_cli=true -m "$marks"
@@ -125,15 +159,16 @@ jobs:
125159
if: matrix.os == 'ubuntu-latest'
126160
env:
127161
OPENML_TEST_SERVER_ADMIN_KEY: ${{ secrets.OPENML_TEST_SERVER_ADMIN_KEY }}
162+
OPENML_USE_LOCAL_SERVICES: "true"
128163
run: |
129164
if [ "${{ matrix.code-cov }}" = "true" ]; then
130165
codecov="--cov=openml --long --cov-report=xml"
131166
fi
132167
133168
if [ "${{ matrix.sklearn-only }}" = "true" ]; then
134-
marks="sklearn and production_server and not test_server"
169+
marks="sklearn and production_server"
135170
else
136-
marks="production_server and not test_server"
171+
marks="production_server"
137172
fi
138173
139174
pytest -n 4 --durations=20 --dist load -sv $codecov -o log_cli=true -m "$marks"
@@ -145,6 +180,25 @@ jobs:
145180
run: | # we need a separate step because of the bash-specific if-statement in the previous one.
146181
pytest -n 4 --durations=20 --dist load -sv --reruns 5 --reruns-delay 1 -m "not test_server"
147182
183+
- name: Upload coverage
184+
if: matrix.code-cov && always()
185+
uses: codecov/codecov-action@v4
186+
with:
187+
files: coverage.xml
188+
token: ${{ secrets.CODECOV_TOKEN }}
189+
fail_ci_if_error: true
190+
verbose: true
191+
192+
- name: Dump server logs
193+
if: always() && steps.start-services.outcome == 'success'
194+
run: |
195+
docker logs openml-php-rest-api -t
196+
197+
- name: Cleanup Docker setup
198+
if: always() && steps.clone-services.outcome == 'success'
199+
run: |
200+
sudo rm -rf services
201+
148202
- name: Check for files left behind by test
149203
if: matrix.os != 'windows-latest' && always()
150204
run: |
@@ -157,15 +211,6 @@ jobs:
157211
exit 1
158212
fi
159213
160-
- name: Upload coverage
161-
if: matrix.code-cov && always()
162-
uses: codecov/codecov-action@v4
163-
with:
164-
files: coverage.xml
165-
token: ${{ secrets.CODECOV_TOKEN }}
166-
fail_ci_if_error: true
167-
verbose: true
168-
169214
dummy_windows_py_sk024:
170215
name: (windows-latest, Py, sk0.24.*, sk-only:false)
171216
runs-on: ubuntu-latest

openml/_api/clients/http.py

Lines changed: 7 additions & 30 deletions
Original file line numberDiff line numberDiff line change
@@ -310,12 +310,8 @@ def _parse_exception_response(
310310

311311
if message and additional_information:
312312
full_message = f"{message} - {additional_information}"
313-
elif message:
314-
full_message = message
315-
elif additional_information:
316-
full_message = additional_information
317313
else:
318-
full_message = ""
314+
full_message = message or additional_information or ""
319315

320316
return code, full_message
321317

@@ -766,7 +762,7 @@ def delete(
766762
def download(
767763
self,
768764
url: str,
769-
handler: Callable[[Response, Path, str], Path] | None = None,
765+
handler: Callable[[Response, Path, str], None] | None = None,
770766
encoding: str = "utf-8",
771767
file_name: str = "response.txt",
772768
md5_checksum: str | None = None,
@@ -806,29 +802,10 @@ def download(
806802
return file_path
807803

808804
response = self.get(url, md5_checksum=md5_checksum)
809-
if handler is not None:
810-
return handler(response, file_path, encoding)
811805

812-
return self._text_handler(response, file_path, encoding)
806+
def write_to_file(response: Response, path: Path, encoding: str) -> None:
807+
path.write_text(response.text, encoding)
813808

814-
def _text_handler(self, response: Response, path: Path, encoding: str) -> Path:
815-
"""
816-
Write response text content to a file.
817-
818-
Parameters
819-
----------
820-
response : requests.Response
821-
HTTP response containing text data.
822-
path : pathlib.Path
823-
Destination file path.
824-
encoding : str
825-
Text encoding for writing the file.
826-
827-
Returns
828-
-------
829-
pathlib.Path
830-
Path to the written file.
831-
"""
832-
with path.open("w", encoding=encoding) as f:
833-
f.write(response.text)
834-
return path
809+
handler = handler or write_to_file
810+
handler(response, file_path, encoding)
811+
return file_path

openml/_api/setup/backend.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -68,7 +68,7 @@ def _backend(self) -> APIBackendBuilder:
6868
key = f"{api_version}_{fallback_api_version}"
6969

7070
if key not in self._backends:
71-
_backend = APIBackendBuilder.build(
71+
_backend = APIBackendBuilder(
7272
api_version=api_version,
7373
fallback_api_version=fallback_api_version,
7474
)

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