Simulations to Run

[phpisciuneri]

Sample Job Script

#!/bin/bash
#SBATCH -A TG-ASC160085
#SBATCH -J tg-1
#SBATCH -o tg-1.o%j
#SBATCH -N 1              # number of nodes
#SBATCH -n 68             # number of cores
#SBATCH -p normal         # normal, development
#SBATCH -t 24:00:00       # hh:mm:ss
#SBATCH --mail-user=phpisciuneri@gmail.com
#SBATCH --mail-type=begin # email on job start
#SBATCH --mail-type=end   # email on job end

root=$SCRATCH/reacting
nnodes=1

## static
cd $root/static/$nnodes
ibrun ./tg simparam.in \
    --repart_freq=99999

## parmetis
cd $root/parmetis/$nnodes
ibrun ./tg simparam.in \
    --redecomp_type=parmetis \
    --repart_freq=10

## paragon | ss16 | nc00
cd $root/paragon/ss16/nc00/$nnodes
ibrun numactl -C all ./tg simparam.in \
    --redecomp_type=paragon \
    --repart_freq=10 \
    --degree_resource_contention=0.0 \
    --shuffle_refine_times=16

## paragon | ss16 | nc05
cd $root/paragon/ss16/nc05/$nnodes 
ibrun numactl -C all ./tg simparam.in \
    --redecomp_type=paragon \
    --repart_freq=10 \
    --degree_resource_contention=0.5 \
    --shuffle_refine_times=16

## paragon | ss16 | nc10
cd $root/paragon/ss16/nc10/$nnodes
ibrun numactl -C all ./tg simparam.in \
    --redecomp_type=paragon \
    --repart_freq=10 \
    --degree_resource_contention=1.0 \
    --shuffle_refine_times=16

1 Node - 68 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0

2 Nodes - 136 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0

3 Nodes - 204 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0

4 Nodes - 272 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0

5 Nodes - 340 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0

6 Nodes - 408 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0

7 Nodes - 476 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0

8 Nodes - 544 cores

• static
• parmetis
• paragon: ss-16, nc-0
• paragon: ss-16, nc-0.5
• paragon: ss-16, nc-1.0