diff --git a/.cruft.json b/.cruft.json
index cf539d2..d449ee6 100644
--- a/.cruft.json
+++ b/.cruft.json
@@ -1,6 +1,6 @@
 {
   "template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-  "commit": "4c63de4715c79bfaf3a90a677c76e9e62170cf50",
+  "commit": "f2f51bbe46b5033eaad6620f8e8540bce791a796",
   "checkout": null,
   "context": {
     "cookiecutter": {
@@ -36,7 +36,7 @@
         "trim_blocks": true
       },
       "_template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-      "_commit": "4c63de4715c79bfaf3a90a677c76e9e62170cf50"
+      "_commit": "f2f51bbe46b5033eaad6620f8e8540bce791a796"
     }
   },
   "directory": null
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 8e1715e..e5325f7 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -7,7 +7,7 @@ default_stages:
 minimum_pre_commit_version: 2.16.0
 repos:
   - repo: https://github.com/biomejs/pre-commit
-    rev: v2.4.4
+    rev: v2.4.6
     hooks:
       - id: biome-format
         exclude: ^\.cruft\.json$ # inconsistent indentation with cruft - file never to be modified manually.
@@ -16,7 +16,7 @@ repos:
     hooks:
       - id: pyproject-fmt
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.4
+    rev: v0.15.5
     hooks:
       - id: ruff-check
         types_or: [python, pyi, jupyter]