align-cli/Cargo.toml at main · snijderlab/align-cli · GitHub

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[package]
name = "align-cli"
version = "0.4.1"
edition = "2024"
authors = ["Douwe Schulte <d.schulte@uu.nl>"]
description = "A command line interface for easily aligning sequences."
license = "MIT OR Apache-2.0"
repository = "https://github.com/snijderlab/align-cli"
readme = "README.md"
include = ["inc/**/*", "src/**/*", "LICENSE", "README.md"]

[[bin]]
name = "align"
path = "src/main.rs"

[dependencies]
clap = { version = "4.5", features = ["derive", "cargo"] }
colored = "3"
itertools = "0.14"
rayon = "1.10"
mzcore = { version = "0.1.1", default-features = false, features = [
    "isotopes",
    "coloured-errors",
] }
mzident = { version = "0.1.0", default-features = false }
mzcv = "0.2.0"
mzalign = {version = "0.1.0", features = ["rayon", "imgt"]}
imgt = {version = "0.1.0", features = ["rayon"]}

[patch.crates-io]
mzalign = { path = "../mzcore/mzalign" }
mzcore = { path = "../mzcore/mzcore" }
mzcv = { path = "../mzcore/mzcv" }
mzident = { path = "../mzcore/mzident" }
imgt = { path = "../mzcore/imgt" }

[profile.release]
debug = true
opt-level = 3
lto = true
codegen-units = 1