Thank you for this great tool. I understand from the freemuxlet documentation that the BEST.GUESS column from the [prefix].clust1.samples.gz file contains the the best assignment for sample ID. How do I interpret the values in the BEST.GUESS column? For example, please see code below. I am interested in being able to assign sample identities to my cells.
table(df_subset$BEST.GUESS)
0,0 1,0 1,1 2,1
4641 13 1 1
What means "0,0", "1,0", "1,1", "2,1"?
Thank you in advance for your help.
Thank you for this great tool. I understand from the freemuxlet documentation that the BEST.GUESS column from the [prefix].clust1.samples.gz file contains the the best assignment for sample ID. How do I interpret the values in the BEST.GUESS column? For example, please see code below. I am interested in being able to assign sample identities to my cells.
table(df_subset$BEST.GUESS)0,0 1,0 1,1 2,1
4641 13 1 1
What means "0,0", "1,0", "1,1", "2,1"?
Thank you in advance for your help.