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  • Correctly Integrate pybind11_json

  • Project cube index... <-> think about using an own function for this

  • Write pybind11 wrapper for KMeans clustering

  • Write pybind11 wrapper for Evolution <-> Integrate Boost and all its functionalities

  • Reorder to have clear modes, etc. think about introducing core...

  • Write code generator for PyTorch =)

  • Integration with TorchDiffEq

Supported:

  • Gitlab Actions CI:
  • Gitlab CI:
    • ci
    • pypi?
    • sonarcloud?
  • Read the docs
  • Doxygen
  • pybind11
  • codecovio
  • sonarcloud

Important commands:

Library::

Build the library:

mkdir build cd build cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=./../install .. make install -j9

Build the python binding package:

pip install --use-feature=in-tree-build .

Run tests:

ctest oder make test

Examples::

Build an example:

cd build cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_PREFIX_PATH=~/ODEVisualization/install .. cmake --build . -j9

Without python bindings:

cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_PREFIX_PATH=~/ODEVisualization/install -DBUILD_PYTHON_BINDINGS=OFF ..

Options to generate a flow equation system:

  • Use the cookiecutter to generate a flow equation system:

    cookiecutter python/flow_equation_wrapper -o ./examples/flow_equations/

    in this case the a default project is generated for the flow equations of the Lorentz Attractor

  • Using the gen_ode_system.py file from the command line

    python python/gen_ode_system.py -o "./examples/flow_equations/" -n "My Flow Equation System"

  • Using the odesolver python package to call the same function from python

    from odesolver.gen_ode_system import generate_ode_system generate_ode_system(output_dir="./examples/flow_equations/", project_name="My Flow Equation System", flow_equation_path="None")

Build an ODESystem generated with the flow_equation wrapper

pip install --use-feature=in-tree-build --install-option="--odevisualization-cmake-prefix-path='~/ODEVisualization/install/'" .

cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=./../install -DCMAKE_PREFIX_PATH=~/ODEVisualization/install -DBUILD_PYTHON_BINDINGS=ON ..

python python/gen_ode_system.py -o "./examples/flow_equations/" -n "Four Point System" -fep "./examples/notebooks/four_point_system/"

cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_PREFIX_PATH="/ODEVisualization/install;/ODEVisualization/examples/flow_equations/LorentzAttractor/install" ..

  • Extend Fixed Point Search to detect infinities
  • Extend to further generation methods of equations
  • New ways to find fixed point
  • Interface to pytorch / RL frameworks