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kadeslukadeslu
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fixing python project
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‎.github/workflows/build.yml‎

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name: Build and Test
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on:
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push:
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branches: [ main, master, develop ]
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pull_request:
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branches: [ main, master ]
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release:
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types: [published]
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jobs:
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test:
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runs-on: ${{ matrix.os }}
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest]
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python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
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cuda-version: ["11.8", "12.1"]
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steps:
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- uses: actions/checkout@v4
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with:
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submodules: recursive
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- name: Set up Python ${{ matrix.python-version }}
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uses: actions/setup-python@v4
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install CUDA Toolkit
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if: matrix.os == 'ubuntu-latest'
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uses: Jimver/cuda-toolkit@v0.2.11
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with:
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cuda: ${{ matrix.cuda-version }}
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- name: Install system dependencies
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if: matrix.os == 'ubuntu-latest'
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run: |
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sudo apt-get update
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sudo apt-get install -y cmake build-essential ninja-build libboost-all-dev
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- name: Install Python dependencies
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run: |
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python -m pip install --upgrade pip
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pip install build wheel setuptools cmake pybind11 ninja
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pip install pytest pytest-cov numpy matplotlib scipy
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- name: Build package (superbuild)
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run: |
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python -m build --wheel
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- name: Install package
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run: |
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pip install dist/*.whl
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- name: Run tests
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run: |
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pytest odevis/python/tests/ -v
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build-wheel:
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if: github.event_name == 'release'
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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with:
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submodules: recursive
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- name: Set up Python
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uses: actions/setup-python@v4
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with:
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python-version: "3.10"
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- name: Install CUDA Toolkit
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uses: Jimver/cuda-toolkit@v0.2.11
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with:
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cuda: "12.1"
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- name: Install system dependencies
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run: |
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sudo apt-get update
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sudo apt-get install -y cmake build-essential ninja-build libboost-all-dev
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- name: Install build dependencies
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run: |
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python -m pip install --upgrade pip
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pip install build twine cmake pybind11 ninja
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- name: Build wheel
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run: |
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python -m build
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- name: Upload to PyPI
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env:
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TWINE_USERNAME: __token__
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TWINE_PASSWORD: ${{ secrets.PYPI_API_TOKEN }}
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run: |
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twine upload dist/*

‎.github/workflows/ci.yml‎

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name: CI
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name: C++ CI
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on:
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# We run CI on pushes to the main branch
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jobs:
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build-and-test:
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name: Testing on ${{matrix.os}}
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name: C++ Testing on ${{matrix.os}}
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runs-on: ${{matrix.os}}
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strategy:
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matrix:
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os: [ubuntu-18.04, macos-10.15]
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os: [ubuntu-latest, macos-latest]
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steps:
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- uses: actions/checkout@v2
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- uses: actions/checkout@v4
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with:
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submodules: 'recursive'
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- name: upgrade g++ compiler on ubuntu
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run: |
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sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-9 10
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sudo update-alternatives --set g++ /usr/bin/g++-9
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- name: Install system dependencies (Ubuntu)
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if: runner.os == 'Linux'
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run: |
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sudo apt-get update
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sudo apt-get install -y cmake build-essential ninja-build libboost-all-dev
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- name: Install system dependencies (macOS)
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if: runner.os == 'macOS'
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run: |
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brew install cmake ninja boost
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- name: make build directory
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run: cmake -E make_directory ${{runner.workspace}}/build
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- name: configure cmake
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shell: bash
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working-directory: ${{runner.workspace}}/build
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run: cmake $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=Debug -DBUILD_DOCS=OFF
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run: cmake $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=Debug -DBUILD_DOCS=OFF -DBUILD_PYTHON_BINDINGS=OFF
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- name: build
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shell: bash
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coverage-test:
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name: Coverage Testing
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runs-on: ubuntu-18.04
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name: C++ Coverage Testing
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v2
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- uses: actions/checkout@v4
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with:
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submodules: 'recursive'
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- name: Install LCov
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run: |
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sudo apt-get install -y lcov
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- name: upgrade g++ compiler on ubuntu
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- name: Install dependencies
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run: |
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sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-9 10
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sudo update-alternatives --set g++ /usr/bin/g++-9
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sudo apt-get update
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sudo apt-get install -y lcov cmake build-essential ninja-build libboost-all-dev
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- name: make build directory
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run: cmake -E make_directory ${{runner.workspace}}/build
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- name: configure cmake
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shell: bash
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working-directory: ${{runner.workspace}}/build
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run: cmake $GITHUB_WORKSPACE -DCMAKE_CXX_FLAGS="--coverage" -DBUILD_DOCS=OFF
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run: cmake $GITHUB_WORKSPACE -DCMAKE_CXX_FLAGS="--coverage" -DBUILD_DOCS=OFF -DBUILD_PYTHON_BINDINGS=OFF
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- name: build
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shell: bash

‎.github/workflows/pypi.yml‎

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This file was deleted.

‎.github/workflows/sonarcloud.yml‎

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name: SonarCloud
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v2
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- uses: actions/checkout@v4
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with:
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fetch-depth: 0 # Shallow clones should be disabled for a better relevancy of analysis
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submodules: 'recursive'

‎.gitignore‎

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# Python build artifacts
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__pycache__/
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*.py[cod]
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*$py.class
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*.so
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*.egg-info/
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dist/
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build/
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.eggs/
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*.egg
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# LaTeX build artifacts
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*.aux
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*.log
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*.out
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*.synctex.gz
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*.toc
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*.pyc
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# CMake build artifacts
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CMakeCache.txt
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CMakeFiles/
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cmake_install.cmake
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Makefile
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install_manifest.txt
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*.cmake
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!*Config.cmake.in
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*-prefix/
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*-build/
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doc/source/*
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!doc/source/figures/
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!doc/source/report.tex
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!doc/source/references.bib
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# Compiled extensions
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*.dll
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*.dylib
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*.pyd
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build/
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install/
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# IDE files
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.vscode/
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.idea/
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__pychache__/
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*.swp
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*.swo
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# OS files
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.DS_Store
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Thumbs.db
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# Testing
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.pytest_cache/
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.coverage
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htmlcov/
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# Virtual environments
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venv/
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env/
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.env
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# Temporary files
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*.tmp
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*.bak
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*~
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# Build directories
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build/
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install/
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cmake_install/
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ODEVisualizationLib.egg-info/
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# Documentation source (keep only specific files)
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doc/source/*
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!doc/source/figures/
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!doc/source/report.tex
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!doc/source/references.bib
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examples/applications/c++/*
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!examples/applications/c++/CMakeLists.txt
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!examples/applications/c++/include

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