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pyproject.toml
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67 lines (60 loc) · 1.54 KB
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[project]
name = "matcha"
version = "0.1.0"
description = "Fast volume alignment by frequency-marched Newton for subtomogram averaging workflows."
readme = "README.md"
requires-python = ">=3.12"
license = { file = "LICENSE" }
authors = [
{ name = "Fabian Kruse" },
{ name = "Valentin Debarnot" },
{ name = "Vinith Kishore" },
{ name = "Ivan Dokmanić" },
]
classifiers = [
"Development Status :: 3 - Alpha",
"Intended Audience :: Science/Research",
"License :: OSI Approved :: MIT License",
"Operating System :: OS Independent",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.12",
"Topic :: Scientific/Engineering :: Image Processing",
]
dependencies = [
"torch",
"torchvision",
"torchaudio",
"numba-cuda[cu12]",
"numpy",
"scipy",
"pandas",
"pyyaml",
"spherical",
"quaternionic",
"starfile",
"cufinufft",
"finufft",
"mrcfile",
"ml-collections",
"torch-harmonics",
]
[project.optional-dependencies]
dev = ["pip-tools"]
[project.scripts]
matcha = "matcha.run:cli"
matcha-example = "matcha.example:cli"
[project.urls]
Homepage = "https://github.com/swing-research/Matcha"
Repository = "https://github.com/swing-research/Matcha"
Documentation = "https://arxiv.org/abs/2603.15285"
[tool.setuptools]
package-dir = {"" = "src"}
include-package-data = true
[tool.setuptools.packages.find]
where = ["src"]
include = ["matcha*"]
[tool.setuptools.package-data]
matcha = ["configs/*.yaml", "data/*.mat"]
[build-system]
requires = ["setuptools>=68", "wheel"]
build-backend = "setuptools.build_meta"