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NC根系分泌物的复现过程中有函数缺失 #1

@zhuhw0916

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@zhuhw0916

在NC根系分泌物的Result1.R里,运行第26行会显示未找到scale.solu函数,“tidyverse”,“phyloseq”以及“ggClusterNet”都导入成功了,这个scale.solu函数是哪个包的旧版本里存在的函数吗?想请教一下作者,谢谢作者大大!
下面是我R的sessionInfo:

R version 4.2.1 (2022-06-23 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 22000)

Matrix products: default

locale:
[1] LC_COLLATE=Chinese (Simplified)_China.utf8
[2] LC_CTYPE=Chinese (Simplified)_China.utf8
[3] LC_MONETARY=Chinese (Simplified)_China.utf8
[4] LC_NUMERIC=C
[5] LC_TIME=Chinese (Simplified)_China.utf8

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] ggClusterNet_0.1.0 phyloseq_1.40.0 forcats_0.5.2 stringr_1.5.0
[5] dplyr_1.0.10 purrr_0.3.5 readr_2.1.3 tidyr_1.2.1
[9] tibble_3.1.8 ggplot2_3.4.0 tidyverse_1.3.2

loaded via a namespace (and not attached):
[1] googledrive_2.0.0 colorspace_2.0-3 ellipsis_0.3.2
[4] rprojroot_2.0.3 XVector_0.36.0 fs_1.5.2
[7] rstudioapi_0.14 remotes_2.4.2 fansi_1.0.3
[10] lubridate_1.9.0 xml2_1.3.3 codetools_0.2-18
[13] splines_4.2.1 cachem_1.0.6 pkgload_1.3.2
[16] ade4_1.7-22 jsonlite_1.8.3 broom_1.0.1
[19] cluster_2.1.3 dbplyr_2.2.1 shiny_1.7.3
[22] compiler_4.2.1 httr_1.4.4 backports_1.4.1
[25] assertthat_0.2.1 Matrix_1.5-3 fastmap_1.1.0
[28] gargle_1.2.1 cli_3.4.1 later_1.3.0
[31] htmltools_0.5.3 prettyunits_1.1.1 tools_4.2.1
[34] igraph_1.3.5 gtable_0.3.1 glue_1.6.2
[37] GenomeInfoDbData_1.2.8 reshape2_1.4.4 Rcpp_1.0.9
[40] Biobase_2.56.0 cellranger_1.1.0 vctrs_0.5.1
[43] Biostrings_2.64.1 rhdf5filters_1.8.0 multtest_2.52.0
[46] ape_5.6-2 nlme_3.1-157 iterators_1.0.14
[49] ps_1.7.2 rvest_1.0.3 timechange_0.1.1
[52] mime_0.12 miniUI_0.1.1.1 lifecycle_1.0.3
[55] devtools_2.4.5 googlesheets4_1.0.1 zlibbioc_1.42.0
[58] MASS_7.3-57 scales_1.2.1 hms_1.1.2
[61] promises_1.2.0.1 parallel_4.2.1 biomformat_1.24.0
[64] rhdf5_2.40.0 curl_4.3.3 memoise_2.0.1
[67] stringi_1.7.8 S4Vectors_0.34.0 desc_1.4.2
[70] foreach_1.5.2 permute_0.9-7 BiocGenerics_0.42.0
[73] pkgbuild_1.4.0 GenomeInfoDb_1.32.4 rlang_1.0.6
[76] pkgconfig_2.0.3 bitops_1.0-7 lattice_0.20-45
[79] Rhdf5lib_1.18.2 htmlwidgets_1.5.4 processx_3.8.0
[82] tidyselect_1.2.0 plyr_1.8.8 magrittr_2.0.3
[85] R6_2.5.1 IRanges_2.30.1 generics_0.1.3
[88] profvis_0.3.7 DBI_1.1.3 pillar_1.8.1
[91] haven_2.5.1 withr_2.5.0 mgcv_1.8-40
[94] survival_3.3-1 RCurl_1.98-1.9 modelr_0.1.10
[97] crayon_1.5.2 utf8_1.2.2 tzdb_0.3.0
[100] urlchecker_1.0.1 usethis_2.1.6 grid_4.2.1
[103] readxl_1.4.1 data.table_1.14.6 callr_3.7.3
[106] vegan_2.6-4 reprex_2.0.2 digest_0.6.30
[109] xtable_1.8-4 httpuv_1.6.6 stats4_4.2.1
[112] munsell_0.5.0 sessioninfo_1.2.2

还有错误信息:

Error in scale.solu(ps = ps0, col.nm = "Group", solu.ck = c("MeOH blank_NA")) :
could not find function "scale.solu"

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