Combine step 5 outputs from different samples

[Vincev454]

Hi everyone,

Is there a way (a script?) to combine all Refseq or subsystem outputs from step 5 in order to get only one table combining the result of ALL samples?

Thanks in advance for your input,
Vince

[transcript]

Hey Vince!

I don't have a script to combine all of the step 5 outputs, but it should be fairly straightforward to do. I'd throw out the percentage column and just use the raw counts column, and then merge by substance or function name.

I could probably throw a script together for this next week, or feel free to look into it yourself and offer an option/pull request.

Best,
Sam