somatem/modules.json at main · treangenlab/somatem · GitHub

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{
    "name": "",
    "homePage": "",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "bakta/baktadbdownload": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "bandage/image": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "checkm2/databasedownload": {
                        "branch": "master",
                        "git_sha": "bcba09053293bbc4fcfecbe094af6d0127f2e0ec",
                        "installed_by": ["modules"]
                    },
                    "checkm2/predict": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "chopper": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "flye": {
                        "branch": "master",
                        "git_sha": "bd0fa881f6b4ed108af6b1f7393d7d37d4dbca97",
                        "installed_by": ["modules"]
                    },
                    "ganon/classify": {
                        "branch": "master",
                        "git_sha": "c8f2c72925cb42eeabc346563fe8fc5518181a3f",
                        "installed_by": ["modules"]
                    },
                    "hostile/clean": {
                        "branch": "master",
                        "git_sha": "cbe28fbf71fd3eddd868140ccd9c3456fa1df363",
                        "installed_by": ["modules"]
                    },
                    "hostile/fetch": {
                        "branch": "master",
                        "git_sha": "f9e0c7508d84c6bbb6aef566bb1f23cf44c2b5bf",
                        "installed_by": ["modules"]
                    },
                    "kraken2/kraken2": {
                        "branch": "master",
                        "git_sha": "71a39f3598935d64ffd65f0960e4d2d4a42ab778",
                        "installed_by": ["modules"]
                    },
                    "minimap2/align": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "minimap2/index": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["modules"]
                    },
                    "nanoplot": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "samtools/coverage": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["modules"]
                    },
                    "samtools/sort": {
                        "branch": "master",
                        "git_sha": "c8be52dba1166c678e74cda9c3a3c221635c8bb1",
                        "installed_by": ["modules"]
                    },
                    "semibin/singleeasybin": {
                        "branch": "master",
                        "git_sha": "27c79c80af5837c7137f63ebf535698d5f5854f4",
                        "installed_by": ["modules"]
                    },
                    "sylph/profile": {
                        "branch": "master",
                        "git_sha": "004e773fc35ebd24063ca4cbef057c94a24208aa",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "c2b22d85f30a706a3073387f30380704fcae013b",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "51ae5406a030d4da1e49e4dab49756844fdd6c7a",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}