Hi,
I am running cellphonedb v5.0.1, it's confusing when I run cpdb_statistical_analysis_method.call using h5ad file, there is notimplementederror. I have change the metafile metadata['cell_type'] = metadata['cell_type'].astype(str) metadata.to_csv('data/metadata.tsv', sep='\t', index=False)
But problem is still there.
I am not sure what is the issue in my files, please could you suggest what might be wrong?
Many thanks
Hi,
I am running cellphonedb v5.0.1, it's confusing when I run cpdb_statistical_analysis_method.call using h5ad file, there is notimplementederror. I have change the metafile
metadata['cell_type'] = metadata['cell_type'].astype(str) metadata.to_csv('data/metadata.tsv', sep='\t', index=False)But problem is still there.
I am not sure what is the issue in my files, please could you suggest what might be wrong?
Many thanks