ScisTree2/pyproject.toml at python · yufengwudcs/ScisTree2 · GitHub

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[build-system]
requires = ["setuptools>=61.0.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "scistree2"
dynamic = ["version"]
description = "Large-scale Inference of Cell Lineage Trees and Genotype Calling from Noisy Single-Cell Data Using Efficient Local Search"
readme = "README.md"
requires-python = ">=3.8"
license = { text = "GPL3" }
authors = [
    { name = "Haotian Zhang", email = "haotianzh@uconn.edu" },
    { name = "Yiming Zhang", email = "ymzhang052@gmail.com"},
    { name = "Yufeng Wu", email = "yufeng.wu@uconn.edu" }
]
keywords = ["cell lineage tree", "fast inference"]

dependencies = [
    "numpy",
    "pandas",
    "pptree",
    "phytreeviz"
]

[tool.setuptools.dynamic]
version = {attr = "scistree2.__version__"}

[tool.cibuildwheel]
skip = "cp36-* *-win32 pp*"

# --- LINUX BUILD ---
[tool.cibuildwheel.linux]
before-build = """
mkdir -p scistree2/bin && \
cd src && \
make clean && \
make && \
mv scistree ../scistree2/bin/scistree
"""

# --- MACOS BUILD ---
[tool.cibuildwheel.macos]
before-build = """
mkdir -p scistree2/bin && \
cd src && \
make clean && \
make && \
mv scistree ../scistree2/bin/scistree
"""

# --- WINDOWS BUILD ---
[tool.cibuildwheel.windows]
# 1. Create bin dir
# 2. Enter src dir
# 3. Run nmake on Makefile.win (generates scistree.exe inside src/)
# 4. Move binary up to scistree/bin/
before-build = """
if not exist scistree2\\bin mkdir scistree2\\bin && \
cd src && \
nmake /f Makefile.win clean && \
nmake /f Makefile.win && \
move scistree.exe ..\\scistree2\\bin\\scistree.exe
"""


[project.urls]
Homepage = "https://github.com/yufengwudcs/ScisTree2"
"Bug Tracker" = "https://github.com/yufengwudcs/ScisTree2/issues"