Skip to content

Add spatial cheatsheet#962

Open
sjspielman wants to merge 2 commits intomasterfrom
sjspielman/934-spatial-cheatsheet
Open

Add spatial cheatsheet#962
sjspielman wants to merge 2 commits intomasterfrom
sjspielman/934-spatial-cheatsheet

Conversation

@sjspielman
Copy link
Copy Markdown
Member

Closes #934

This PR starts the spatial cheatsheet with functions used in the first notebook. Note that I left some html comments in there because many of these packages are not (yet?!) on rdrr but there was enough on Bioconductor to link to directly.

I decided to only focus on the core spatial functions here and didn't include tidyverse functions, in part because we envision this workshop (at least to start). I also have a shorter table for SpatialExperiment, but I do suggest looking at the other single-cell cheatsheets for more info about functions that will appear. It would be quick enough to bring any of this into this cheatsheet if preferred though!

That said, we do have this older nice to have issue #683 which might be something to tackle at this point rather than duplicating e.g. the tidyverse functions across cheatsheets. To be clear I'm not necessarily saying we should do this, just wanted to resurface it as potentially relevant.

@sjspielman sjspielman requested a review from jashapiro April 3, 2026 17:35
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

Initiate spatial module cheatsheet

1 participant