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GII.2-Challenge-Study

Assemblies and variant calling output for 51/63 GII.2 Challenge Study Norovirus isolates.

  • refgenomes - reference genome fasta and gff3 used for variant calling. Here, AY134748 was used (https://www.ncbi.nlm.nih.gov/nuccore/AY134748.1)
  • vc_output - variant calling pipeline output after mapping samples to reference
  • NoV.SummaryTables.xlsx - virmap summary tables

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