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fix: manuscript sweep, Zenodo DOI/ORCID, README, repo hardening#23

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tbitcs merged 2 commits into
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May 27, 2026
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fix: manuscript sweep, Zenodo DOI/ORCID, README, repo hardening#23
tbitcs merged 2 commits into
mainfrom
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@tbitcs tbitcs commented May 27, 2026

Summary

Full manuscript sweep and release preparation for Zenodo publication.

Manuscript fixes

  • Table 1 column overflow: widened p{1.6cm} to p{2.2cm} (Miscalibration row no longer overflows)
  • Missing dollar-t dollar in Section Methodology item 3: restored missing t variables in recursive feedback step description
  • BM25 misnaming removed from 8 locations: renamed to token-overlap retrieval to match the actual cosine-style implementation (code docstring explicitly says cosine-style token overlap)

Publication metadata

  • Author block: ORCID 0009-0003-7269-956X and Zenodo DOI doi:10.5281/zenodo.20412150
  • Pre-registration section: Zenodo DOI hyperlink added
  • Rebuilt arxiv/main.pdf (clean 4-pass pdflatex+bibtex, 415 KB)

README / REPRODUCE

  • Zenodo DOI badge, ORCID line, updated citation BibTeX with DOI and publisher
  • REPRODUCE.md: added manifest hash-drift note for numpy version differences

Repo

  • Merged dependabot PR number 22 (numpy 2.4.5 to 2.4.6)
  • enforce_admins enabled on main branch

Co-Authored-By: Oz oz-agent@warp.dev

tbitcs and others added 2 commits May 27, 2026 09:17
…ap; add Zenodo DOI+ORCID; update README+REPRODUCE

- Table 1 first column widened p{1.6cm}→p{2.2cm} to fix Miscalibration overflow
- Section 6 item 3: restore missing \\\$\ in recursive feedback description
- Rename BM25 to token-overlap retrieval in all 8 manuscript locations (abstract,
  symbols table, notation, Table 1, methodology, ablation, Section 8, limitations)
  to match the actual cosine-style token-overlap implementation in BM25Retriever
- Author block: add ORCID 0009-0003-7269-956X and Zenodo DOI doi:10.5281/zenodo.20412150
- Pre-registration section: add Zenodo DOI hyperlink
- README: add Zenodo DOI badge, ORCID, update citation BibTeX with DOI
- REPRODUCE.md: add manifest hash-drift note for numpy version differences
- Rebuild arxiv/main.pdf (compiles cleanly, 4-pass pdflatex+bibtex)
- LEDGER: record Zenodo DOI, publication plan, ORCID

Co-Authored-By: Oz <oz-agent@warp.dev>
…e fence)

Co-Authored-By: Oz <oz-agent@warp.dev>
@tbitcs tbitcs merged commit 6474863 into main May 27, 2026
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