Final hw python bi#4

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final_hw_python_bi

Commits on Oct 6, 2023

Commits on Oct 7, 2023

Create amino_analyzer_utils.py
CaptnClementine
authored
Add 'is_aa' function to check if a sequence contains only amino acids
CaptnClementine
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Add 'choose_weight' function to choose the weight type
CaptnClementine
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Add 'aa_weight' function to calculate the protein weight
CaptnClementine
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Add 'count_hydroaffinity' function to count it in protein sequence
CaptnClementine
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Add 'peptide_cutter' to identifies cleavage sites for "trypsin" and "chymotrypsin"
CaptnClementine
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Add 'one_to_three_letter_code' function to convert protein sequence
CaptnClementine
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Add 'sulphur_containing_aa_counter' function
CaptnClementine
authored
Add 'run_amino_analyzer' function to analyse protein sequence in one-letter code
CaptnClementine
authored
Create dna_rna_tools_utils.py
CaptnClementine
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Add 'is_dna' function to check if a sequence is DNA
CaptnClementine
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Add 'is_rna' function to check if a sequence is RNA
CaptnClementine
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Add 'reverse' function to reverse a sequence
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Add 'complement' function to find complement of sequence
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Add 'reverse_complement' function to find reverse complement sequence
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Add 'reverse_transcription' function to reverse transcription of RNA
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Add 'type_rna_or_dna' function to detect type of sequence
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Add 'has_start_codon' function to check if RNA has start codon
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Add 'is_palindrome' function to check if a sequence is a palindrome
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Add 'transcribe' function to transcribe a DNA sequence into RNA
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Add 'run_dna_rna_tools' function to make various opertaions with DNA/RNA
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Update README.md
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authored

Commits on Oct 14, 2023

Add typing library
CaptnClementine
authored

Commits on Oct 16, 2023

Commits on Oct 17, 2023

Commits on Oct 18, 2023

Update 'filter_dna' function to write output file in directory
CaptnClementine
authored

Commits on Oct 31, 2023

Commits on Feb 23, 2024

Commits on Feb 24, 2024

Commits on Feb 25, 2024

Add check_alphabet to class AminoAcidSequence
CaptnClementine
authored

Commits on Apr 30, 2024