GitHub - Chaogan-Yan/REST: Resting-State fMRI Data Analysis Toolkit

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 23 Commits
Template		Template
man		man
mask		mask
rest_spm5_files		rest_spm5_files
README.txt		README.txt
Thumbs.db		Thumbs.db
alff.m		alff.m
alff_gui.fig		alff_gui.fig
alff_gui.m		alff_gui.m
f_alff.m		f_alff.m
f_alff_gui.fig		f_alff_gui.fig
f_alff_gui.m		f_alff_gui.m
fc.m		fc.m
fc_gui.fig		fc_gui.fig
fc_gui.m		fc_gui.m
icoCoronal.jpg		icoCoronal.jpg
icoOrthogonal.jpg		icoOrthogonal.jpg
icoSagittal.jpg		icoSagittal.jpg
icoTransverse.jpg		icoTransverse.jpg
info.xml		info.xml
logo.jpg		logo.jpg
reho.m		reho.m
reho_gui.fig		reho_gui.fig
reho_gui.m		reho_gui.m
rest.log		rest.log
rest.m		rest.m
rest_AlphaSim.m		rest_AlphaSim.m
rest_AlphaSim_gui.fig		rest_AlphaSim_gui.fig
rest_AlphaSim_gui.m		rest_AlphaSim_gui.m
rest_CallBrainNetViewer.m		rest_CallBrainNetViewer.m
rest_ChangeDicomInfo.m		rest_ChangeDicomInfo.m
rest_ChangeOrigin.m		rest_ChangeOrigin.m
rest_ChangeOrigin_Recursive.m		rest_ChangeOrigin_Recursive.m
rest_CheckDataDir.m		rest_CheckDataDir.m
rest_Cohe_ReHo.m		rest_Cohe_ReHo.m
rest_Cohe_ReHo_Brain.m		rest_Cohe_ReHo_Brain.m
rest_Corr2FisherZ.m		rest_Corr2FisherZ.m
rest_CorrectionThresholdsByAlphaSim.fig		rest_CorrectionThresholdsByAlphaSim.fig
rest_CorrectionThresholdsByAlphaSim.m		rest_CorrectionThresholdsByAlphaSim.m
rest_DegreeCentrality.m		rest_DegreeCentrality.m
rest_DegreeCentrality_gui.fig		rest_DegreeCentrality_gui.fig
rest_DegreeCentrality_gui.m		rest_DegreeCentrality_gui.m
rest_DicomSorter.m		rest_DicomSorter.m
rest_DicomSorter_gui.fig		rest_DicomSorter_gui.fig
rest_DicomSorter_gui.m		rest_DicomSorter_gui.m
rest_DivideMeanWithinMask.m		rest_DivideMeanWithinMask.m
rest_ExtractROITC.m		rest_ExtractROITC.m
rest_ExtractROITC_MultiValues.m		rest_ExtractROITC_MultiValues.m
rest_ExtractROITC_gui.fig		rest_ExtractROITC_gui.fig
rest_ExtractROITC_gui.m		rest_ExtractROITC_gui.m
rest_FDR_gui.fig		rest_FDR_gui.fig
rest_FDR_gui.m		rest_FDR_gui.m
rest_Fix_Read_Write_Error.m		rest_Fix_Read_Write_Error.m
rest_GRFCorrection_gui.fig		rest_GRFCorrection_gui.fig
rest_GRFCorrection_gui.m		rest_GRFCorrection_gui.m
rest_GRF_Threshold.m		rest_GRF_Threshold.m
rest_GRF_for_sliceview.fig		rest_GRF_for_sliceview.fig
rest_GRF_for_sliceview.m		rest_GRF_for_sliceview.m
rest_IdealFilter.m		rest_IdealFilter.m
rest_ImgCal_gui.fig		rest_ImgCal_gui.fig
rest_ImgCal_gui.m		rest_ImgCal_gui.m
rest_Nii2NiftiPairs.m		rest_Nii2NiftiPairs.m
rest_Nii2NiftiPairs_gui.fig		rest_Nii2NiftiPairs_gui.fig
rest_Nii2NiftiPairs_gui.m		rest_Nii2NiftiPairs_gui.m
rest_NormalityTest.m		rest_NormalityTest.m
rest_NormalityTest_gui.fig		rest_NormalityTest_gui.fig
rest_NormalityTest_gui.m		rest_NormalityTest_gui.m
rest_Powerspectrum_start.m		rest_Powerspectrum_start.m
rest_ROIList_gui.fig		rest_ROIList_gui.fig
rest_ROIList_gui.m		rest_ROIList_gui.m
rest_ReadAnalyzeImage.m		rest_ReadAnalyzeImage.m
rest_ReadLutColorScheme.m		rest_ReadLutColorScheme.m
rest_ReadNiftiImage.m		rest_ReadNiftiImage.m
rest_ReadNiiNum.m		rest_ReadNiiNum.m
rest_RecursiveDir.m		rest_RecursiveDir.m
rest_RegressOutCovariates.m		rest_RegressOutCovariates.m
rest_RegressOutCovariates_gui.fig		rest_RegressOutCovariates_gui.fig
rest_RegressOutCovariates_gui.m		rest_RegressOutCovariates_gui.m
rest_ResliceImage.m		rest_ResliceImage.m
rest_ResliceImage_gui.fig		rest_ResliceImage_gui.fig
rest_ResliceImage_gui.m		rest_ResliceImage_gui.m
rest_SetROI.m		rest_SetROI.m
rest_Smoothest.m		rest_Smoothest.m
rest_Smoothest_gui.fig		rest_Smoothest_gui.fig
rest_Smoothest_gui.m		rest_Smoothest_gui.m
rest_SphereROI.m		rest_SphereROI.m
rest_Statistic_gui.fig		rest_Statistic_gui.fig
rest_Statistic_gui.m		rest_Statistic_gui.m
rest_TFRtoZ.m		rest_TFRtoZ.m
rest_TwoGroupCorr.m		rest_TwoGroupCorr.m
rest_Utilities_gui.fig		rest_Utilities_gui.fig
rest_Utilities_gui.m		rest_Utilities_gui.m
rest_VMHC.m		rest_VMHC.m
rest_VMHC_gui.fig		rest_VMHC_gui.fig
rest_VMHC_gui.m		rest_VMHC_gui.m
rest_Write4DNIfTI.m		rest_Write4DNIfTI.m
rest_WriteAnalyzeImage.m		rest_WriteAnalyzeImage.m
rest_WriteNiftiImage.m		rest_WriteNiftiImage.m
rest_ancova1.m		rest_ancova1.m
rest_ancova1_Image.m		rest_ancova1_Image.m

Repository files navigation

Setup:
1. Simply add the path to MATLAB just like SPM.
2. Enter "rest" in MATLAB command line where quotation marks are not contained.

Help:
Please refer to www.restfmri.net

Xiao-Wei Song, 20070726