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Pull requests: Clinical-Genomics/oncorefiner

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Pull requests list

Add standardise esvee vcf subworkflow
#167 opened Jul 31, 2026 by mathiasbio Contributor • Draft
1
feat: add local module standardise esvee
#164 opened Jul 30, 2026 by mathiasbio Contributor • Draft
2
feat: standardise esvee SV records
#163 opened Jul 30, 2026 by mathiasbio Contributor • Draft
2
feat: Add gens subwf
#158 opened Jul 28, 2026 by kristinebilgrav Contributor • Draft
2
docs: Update CONTRIBUTING.md from nf-dev-guidelines Skip-Changelog
#155 opened Jul 1, 2026 by nf-guidelines-sync-bot Bot Loading…
14
feat: Common contribution guidelines
#154 opened Jul 1, 2026 by fellen31 Contributor Loading…
15
feat: Add cnv report generation
#147 opened Jun 23, 2026 by fevac Collaborator Loading…
7 tasks done
4
feat: Implement GENMOD in PROCESS_SV
#146 opened Jun 22, 2026 by kristinebilgrav Contributor • Draft
2
feat: Add genmod sv parameters and rename the snv genmod parameter
#144 opened Jun 22, 2026 by kristinebilgrav Contributor • Draft
2
feat: add local module prepare_cobalt_for_gens
#122 opened Jun 3, 2026 by mathiasbio Contributor Loading…
30
feat: add PREPARE_AMBER_FOR_GENSlocal module
#120 opened Jun 2, 2026 by mathiasbio Contributor Loading…
5
feat: add gens files
#119 opened Jun 2, 2026 by mathiasbio Contributor • Draft
2
feat: Annotate sv linx
#115 opened May 29, 2026 by kristinebilgrav Contributor Loading…
14
Subworkflow specific configs
#105 opened May 20, 2026 by kristinebilgrav Contributor • Draft
5
fix: Update publishing strategy for PROCESS_SVS
#93 opened May 7, 2026 by beatrizsavinhas Contributor Loading…
5
feat: made all steps optional
#47 opened Mar 11, 2026 by fevac Collaborator • Draft
3
ProTip! Updated in the last three days: updated:>2026-07-31.