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EBISPOT

EMBL-EBI Samples, Phenotypes, and Ontologies Team

59 followers
https://www.ebi.ac.uk/spot/

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efo efo Public

Github repo for the Experimental Factor Ontology (EFO)

Python 63 15
DUO DUO Public

Ontology for consent codes and data use requirements

Makefile 68 17
CMPO CMPO Public

Cellular Microscopy Phenotype Ontology

Python 6 2
ols4 ols4 Public

The EMBL-EBI Ontology Lookup Service (OLS)

Java 86 40

Repositories

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All CSS Dockerfile HTML Java JavaScript Jinja Jupyter Notebook Makefile Python Ruby Shell TeX TypeScript Web Ontology Language

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Showing 10 of 105 repositories

zooma2 Public

EBISPOT/zooma2’s past year of commit activity

Java 0 Apache-2.0 0 0 0 Updated Apr 29, 2026
oxo2 Public
A SSSOM compliant implementation of OxO that is backwards compatible with OxO version 1

EBISPOT/oxo2’s past year of commit activity

Java 1 Apache-2.0 0 0 0 Updated Apr 29, 2026
ols4 Public
The EMBL-EBI Ontology Lookup Service (OLS)

EBISPOT/ols4’s past year of commit activity

Java 86 Apache-2.0 40 86 (1 issue needs help) 15 Updated Apr 29, 2026
gwas-utils Public
Collection of tools and scripts to manage GWAS Catalog related infrastructure.

EBISPOT/gwas-utils’s past year of commit activity

Python 6 3 10 2 Updated Apr 29, 2026
efo Public
Github repo for the Experimental Factor Ontology (EFO)

EBISPOT/efo’s past year of commit activity

Python 63 15 202 (2 issues need help) 13 Updated Apr 29, 2026
GrEBI Public
HPC aggregation pipeline and API/MCP server for LLM-mediated biomedical data integration

EBISPOT/GrEBI’s past year of commit activity

Jupyter Notebook 4 Apache-2.0 3 16 0 Updated Apr 29, 2026
gwas-ui Public

EBISPOT/gwas-ui’s past year of commit activity

JavaScript 5 Apache-2.0 4 18 5 Updated Apr 27, 2026
gwas-beyond-snps Public
Supporting new types of genetic variation in the GWAS Catalog

EBISPOT/gwas-beyond-snps’s past year of commit activity

Python 0 Apache-2.0 0 0 0 Updated Apr 24, 2026
goci Public
GWAS Catalog Ontology and Curation Infrastructure

EBISPOT/goci’s past year of commit activity

Java 26 Apache-2.0 19 319 9 Updated Apr 23, 2026
gwas-data-services Public

EBISPOT/gwas-data-services’s past year of commit activity

Java 0 Apache-2.0 0 4 0 Updated Apr 22, 2026

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