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EVA-4081: Use previous mappings as source of truth and Zooma/OxO only for curation#497

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apriltuesday merged 12 commits intoEBIvariation:masterfrom
apriltuesday:EVA-4081
Mar 12, 2026
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EVA-4081: Use previous mappings as source of truth and Zooma/OxO only for curation#497
apriltuesday merged 12 commits intoEBIvariation:masterfrom
apriltuesday:EVA-4081

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@apriltuesday apriltuesday commented Feb 27, 2026

Main functional changes are:

  • trait_processing.py and trait.py - new logic for determining when traits are finished
  • output.py and create_table_for_manual_curation.py - consolidated logic for generating the final candidates for curation in the former

I also updated the files that the E2E tests were based on, particularly the mapping file as a lot of the mappings were obsolete which wasn't giving a realistic representation of what the curation would look like. The spreadsheet I used for the test can be viewed here, the full dataset is still pending.

@apriltuesday apriltuesday marked this pull request as ready for review March 2, 2026 15:25
@apriltuesday apriltuesday self-assigned this Mar 2, 2026
@apriltuesday apriltuesday requested a review from tcezard March 2, 2026 15:25
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It looks good just left one question on something I'm not sure about.

@apriltuesday apriltuesday requested a review from tcezard March 6, 2026 09:24
@apriltuesday apriltuesday merged commit eb247a0 into EBIvariation:master Mar 12, 2026
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2 participants