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@GenomicsAotearoa

Genomics Aotearoa

See our GitHub pages (link below) for more information on our public repositories.

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  1. metagenomics_summer_school metagenomics_summer_school Public

    Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber

    HTML 67 32

  2. methods-and-musings methods-and-musings Public

    A (growing) collection of information contributed by Genomics Aotearoa members. Semi blog post style bites of content.

    9 6

  3. Kakapo Kakapo Public

    Scripts and code for Kākāpō genomic data

    Jupyter Notebook 14 1

  4. BioinformaticsTrainingProgramme BioinformaticsTrainingProgramme Public

    Material for bioinformatics training programme website

    HTML

Repositories

Showing 10 of 71 repositories
  • RNA-seq-data-analysis-workflow Public

    A workflow for analysing RNA-seq data, aimed at new users who want to understand the methods available.

    GenomicsAotearoa/RNA-seq-data-analysis-workflow’s past year of commit activity
    CSS 0 GPL-3.0 1 12 0 Updated Feb 4, 2026
  • introduction-to-shell Public

    introduction to shell

    GenomicsAotearoa/introduction-to-shell’s past year of commit activity
    HTML 0 GPL-3.0 1 0 0 Updated Feb 4, 2026
  • BioinformaticsTrainingProgramme Public

    Material for bioinformatics training programme website

    GenomicsAotearoa/BioinformaticsTrainingProgramme’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 3, 2026
  • High-quality-genomes Public

    This repository aims to hosting workflows/codes that have been developed for GA high-quality-genome projects.

    GenomicsAotearoa/High-quality-genomes’s past year of commit activity
    HTML 7 10 0 0 Updated Feb 1, 2026
  • genomic-data-carpentry-nz Public

    WORK IN PROGRESS

    GenomicsAotearoa/genomic-data-carpentry-nz’s past year of commit activity
    CSS 0 0 4 0 Updated Jan 30, 2026
  • Hoiho Public Forked from jguhlin/Hoiho

    Scripts, Parameters, and Analyses for Hoiho Publication

    GenomicsAotearoa/Hoiho’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Jan 29, 2026
  • reproducibility_with_git_and_quarto Public

    A two day workshop on reproducibility with Git and Quarto

    GenomicsAotearoa/reproducibility_with_git_and_quarto’s past year of commit activity
    JavaScript 1 GPL-3.0 0 5 0 Updated Nov 26, 2025
  • IndigiDataAotearoa-IntroToShell Public
    GenomicsAotearoa/IndigiDataAotearoa-IntroToShell’s past year of commit activity
    CSS 1 GPL-3.0 1 0 0 Updated Nov 20, 2025
  • Introduction-to-R Public

    Introduction to R

    GenomicsAotearoa/Introduction-to-R’s past year of commit activity
    3 CC0-1.0 2 2 0 Updated Oct 12, 2025
  • hts_workshop_mpi Public

    Training materials for the 2025 HTS Plant Health and Environment Laboratory workshop

    GenomicsAotearoa/hts_workshop_mpi’s past year of commit activity
    HTML 3 3 0 0 Updated Oct 7, 2025
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