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Add site-effect correction - #133

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claraElk wants to merge 33 commits into
mainfrom
add_site
Open

Add site-effect correction#133
claraElk wants to merge 33 commits into
mainfrom
add_site

Store the dmn similarity results in a subdirectory

3af2f83
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Codecov / codecov/project succeeded Aug 10, 2026 in 0s

73.61% (-0.18%) compared to 64b4b42, passed because coverage increased by 0.42% when compared to adjusted base (73.18%)

View this Pull Request on Codecov

73.61% (-0.18%) compared to 64b4b42, passed because coverage increased by 0.42% when compared to adjusted base (73.18%)

Details

Codecov Report

❌ Patch coverage is 88.61789% with 28 lines in your changes missing coverage. Please review.
✅ Project coverage is 73.61%. Comparing base (64b4b42) to head (3af2f83).

Files with missing lines Patch % Lines
wonkyconn/run.py 64.28% 10 Missing ⚠️
wonkyconn/workflow.py 82.69% 9 Missing ⚠️
wonkyconn/file_index/base.py 88.88% 4 Missing ⚠️
wonkyconn/textual_app.py 73.33% 4 Missing ⚠️
wonkyconn/config.py 92.85% 1 Missing ⚠️
Additional details and impacted files

Impacted file tree graph

@@            Coverage Diff             @@
##             main     #133      +/-   ##
==========================================
- Coverage   73.79%   73.61%   -0.18%     
==========================================
  Files          26       20       -6     
  Lines        1408     1190     -218     
==========================================
- Hits         1039      876     -163     
+ Misses        369      314      -55     
Files with missing lines Coverage Δ
wonkyconn/atlas.py 97.75% <100.00%> (+0.02%) ⬆️
wonkyconn/features/age_sex_prediction.py 100.00% <100.00%> (ø)
wonkyconn/features/calculate_degrees_of_freedom.py 89.18% <100.00%> (ø)
...kyconn/features/calculate_gradients_correlation.py 98.80% <100.00%> (+0.05%) ⬆️
wonkyconn/features/distance_dependence.py 100.00% <100.00%> (ø)
wonkyconn/features/network.py 100.00% <100.00%> (ø)
wonkyconn/features/quality_control_connectivity.py 94.59% <100.00%> (+0.47%) ⬆️
wonkyconn/file_index/bids.py 95.52% <100.00%> (+0.06%) ⬆️
wonkyconn/logger.py 100.00% <ø> (+55.55%) ⬆️
wonkyconn/visualization/plot.py 97.05% <100.00%> (-0.45%) ⬇️
... and 5 more

... and 6 files with indirect coverage changes

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