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Update website content: add news posts, update config, structure upd.#40

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MelihDarcanxyz merged 3 commits intoHUBioDataLab:mainfrom
furkannecatiinan:main
Oct 25, 2025
Merged

Update website content: add news posts, update config, structure upd.#40
MelihDarcanxyz merged 3 commits intoHUBioDataLab:mainfrom
furkannecatiinan:main

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@furkannecatiinan
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  • Added 7 new news posts covering recent lab activities:

    • ISMB/ECCB 2023, 2024, 2025 participation
    • HIBIT 2024 participation
    • ChemPile dataset NeurIPS publication
    • Turkish universities DrugGen AI project
    • AI-driven poxvirus inhibitors research
    • DrugGen Nature Machine Intelligence publication
    • Tunca Doğan Purdue seminar
  • Reorganized blog section → news section

  • Updated navigation and page structure

  • Added new image assets for news and sections

  • Updated _config.yaml with new info (fixed wrong footer's links)

  • Updated footer and post information displays

  • Removed default txts, added some description

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github-actions bot commented Oct 25, 2025

PR Preview Action v1.4.7
🚀 Deployed preview to https://HUBioDataLab.github.io/hubiodatalab.github.io/preview/pr-40/
on branch gh-pages at 2025-10-25 16:34 UTC

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All is good, can you just please revert the footer? We should give them credit. Other stuff is trivial, I just wrote them to give a feedback in general, they don't need to be changed.

Comment on lines +28 to +22
{{ site.title }}
  |   Built with
<a href="https://github.com/greenelab/lab-website-template">
Lab Website Template
</a>
Hacettepe University Biological Data Science Laboratory
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We need to give them credit, so it should stay as is.

Comment on lines +4 to +5
<footer
class="background"
style="--image: url('{{ image | relative_url | uri_escape }}')"
{% if dark == true or dark == false %}
data-dark="{{ dark }}"
{% endif %}
data-size="wide"
>
<footer class="background" style="--image: url('{{ image | relative_url | uri_escape }}')" {% if dark==true or
dark==false %} data-dark="{{ dark }}" {% endif %} data-size="wide">
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This is just formatting right? If that's the case, it's better to do it in a seperate commit.

Comment on lines +20 to +16
{% assign key = link[0] %}
{% assign value = link[1] %}
{% include button.html type=key text="" link=value style="bare" %}
{% assign key = link[0] %}
{% assign value = link[1] %}
{% include button.html type=key text="" link=value style="bare" %}
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This is just formatting right? If that's the case, it's better to do it in a seperate commit.

Comment on lines +35 to +27
<input
type="checkbox"
class="dark-toggle"
data-tooltip="Dark mode"
aria-label="toggle dark mode"
oninput="onDarkToggleChange(event)"
>
</footer>
<input type="checkbox" class="dark-toggle" data-tooltip="Dark mode" aria-label="toggle dark mode"
oninput="onDarkToggleChange(event)">
</footer> No newline at end of file
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This is just formatting right? If that's the case, it's better to do it in a seperate commit.

Comment on lines +3 to +39
{% assign authors = include.author
| join: ","
| downcase
| split: ","
| array_filter
%}
{% for author in authors %}
{% assign member = site.members
| where_exp: "member", "member.slug == author"
| first
%}
{% if member %}
{% include portrait.html lookup=author style="tiny" %}
{% else %}
<span data-tooltip="Author">
{% include icon.html icon="fa-solid fa-feather-pointed" %}
<span>{{ author }}</span>
</span>
{% endif %}
{% endfor %}
{% assign authors = include.author
| join: ","
| downcase
| split: ","
| array_filter
%}
{% for author in authors %}
{% assign member = site.members
| where_exp: "member", "member.slug == author"
| first
%}
{% if member %}
{% include portrait.html lookup=author style="tiny" %}
{% else %}
<span data-tooltip="Author">
{% include icon.html icon="fa-solid fa-feather-pointed" %}
<span>{{ author }}</span>
</span>
{% endif %}
{% endfor %}
{% endif %}

{% assign published = include.published | date: "%B %d, %Y" %}
{% assign updated = include.updated | date: "%B %d, %Y" %}

{% if published %}
<span data-tooltip="Originally published on">
{% include icon.html icon="fa-regular fa-calendar" %}
<span>{{ published }}</span>
</span>
<span data-tooltip="Originally published on">
{% include icon.html icon="fa-regular fa-calendar" %}
<span>{{ published }}</span>
</span>
{% endif %}

{% if updated and updated != "" and updated != published %}
<span data-tooltip="Last updated on">
{% include icon.html icon="fa-solid fa-clock-rotate-left" %}
<span>{{ updated }}</span>
</span>
<span data-tooltip="Last updated on">
{% include icon.html icon="fa-solid fa-clock-rotate-left" %}
<span>{{ updated }}</span>
</span>
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This is just formatting right? If that's the case, it's better to do it in a seperate commit.

{% if include.tags %}
{% include tags.html tags=include.tags link="blog" %}
{% endif %}
{% include tags.html tags=include.tags link="news" %}
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Looks good to me, except the formatting, as mentioned before.

Comment on lines +11 to +13
{% assign key = link[0] %}
{% assign value = link[1] %}
{% include button.html type=key link=value style="bare" %}<br>
{% assign key = link[0] %}
{% assign value = link[1] %}
{% include button.html type=key link=value style="bare" %}<br>
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This is just formatting right? If that's the case, it's better to do it in a seperate commit.

Comment on lines +24 to +32
| default: page.name
| default: page.title
| join: ","
| split: ","
| array_filter
| default: page.name
| default: page.title
| join: ","
| split: ","
| array_filter
%}

{% capture search -%}
research/?search={% for alias in aliases %}"{{ alias }}" {% endfor %}
research/?search={% for alias in aliases %}"{{ alias }}" {% endfor %}
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This is just formatting right? If that's the case, it's better to do it in a seperate commit.

@MelihDarcanxyz MelihDarcanxyz merged commit 1604606 into HUBioDataLab:main Oct 25, 2025
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2 participants