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Fix/zenodo download python detection #4

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Fix/zenodo download python detection #4

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2262995
Add Python interpreter detection to download_from_zenodo.sh
pietroluigiwilli Feb 5, 2026
02ef26b
inference added
pietroluigiwilli Feb 13, 2026
e939e90
inference.ipynb added
pietroluigiwilli Feb 13, 2026
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14 changes: 12 additions & 2 deletions download_from_zenodo.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -38,6 +38,16 @@ declare -A FILE_MAP=(
["SpecBridge_Spectraverse_candidates.pkl"]="data/SpecBridge_Spectraverse_candidates.pkl"
)

# Determine which Python to use
if command -v python3 >/dev/null 2>&1; then
PYTHON_CMD=python3
elif command -v python >/dev/null 2>&1; then
PYTHON_CMD=python
else
echo "❌ Failed to find a Python interpreter (python3 or python)."
exit 1
fi

# Get file list from Zenodo
echo "📦 Fetching file list from Zenodo..."
FILES_JSON=$(curl -s "${ZENODO_URL}")
Expand All @@ -56,7 +66,7 @@ for zenodo_name in "${!FILE_MAP[@]}"; do
local_path="${FILE_MAP[$zenodo_name]}"

# Extract download URL for this file
download_url=$(echo "$FILES_JSON" | python3 -c "
download_url=$(echo "$FILES_JSON" | "$PYTHON_CMD" -c "
import sys, json
data = json.load(sys.stdin)
for f in data.get('files', []):
Expand Down Expand Up @@ -89,7 +99,7 @@ for f in data.get('files', []):
echo " → ${local_path}"

# Get file size for progress
file_size=$(echo "$FILES_JSON" | python3 -c "
file_size=$(echo "$FILES_JSON" | "$PYTHON_CMD" -c "
import sys, json
data = json.load(sys.stdin)
for f in data.get('files', []):
Expand Down
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