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Influenzanet-getting-started

This is a brief guide to the different repositories present within the scope of Influenzanet. It also acts as the WIKI to the major actions - installation, configurations, updates and maintenance; that can be performed with Influenzanet.

Note: We refer to each repository that forms a part of Influenzanet with the term 'service'. While not all are services in the true sense of the word, it helps make our explanation easier.

First we take a look at the different parts of Influenzanet. Here, we use the term repository to specify a "Github repository" unless stated otherwise.

Current Service Information

These repositories form the core services of the Influenzanet platform.

Service Repository Function
participant-api api-gateway Default backend API Gateway for web participants
management-api api-gateway BAckend API Gateway for the researchers and admins of Influenzanet
study-service study-service Backend service responsible for mananging studies and surveys in the system
user-management-service user-management-service Backed service for the management of users in the system
email-client-service messaging-service Backend service responsible for sending emails out of the system
message-scheduler messaging-service Backend service that triggers events to send out emails periodically
messaging-service messaging-service Backend service that manages processing of all messages in the system
logging-service logging-service Backend service responsible for logging into DB information from all services
participant-webapp participant-webapp React based front-end of the Influenzanet platform

Supplementary Service Information

These repositories act as supporting services and scripts to help set up, perform configurations and/or deploy the Influenzanet platform.

Service Repository Function
study-manager study-manager-app Contains a React Application to help build surveys for researchers and export it as a JSON
admin-scripts admin-scripts Scripts to create studies, upload surveys, upload email templates, and perform config changes on a running Influenzanet platform
cluster-management cluster-management Scripts that help install Influenzanet on a GKE cluster, contains scripts to also stop all deployed services on a running cluster and restart them

Walkthrough Sections

The walkthrough sections are divided into three main categories:

  1. Installation and Set-up
  2. Initial system configurations
  3. How to make changes & re-deploy
  4. Maintenance Activities

Each section consists of topics that are to be followed in the provided order. For sections like maintenance activities you can jump directly to the area of concern.

Installation and Set-up

In this section we explain the following tasks:

Section Topic Instruction File
Starting from scratch - set up the required Github repositories repository-creation
Set-up dockerhub and automated builds dockerhub-setup
Prepare a Google Kubernetes Environment and Install Influenzanet gke-influenzanet-installation

Initial System Configurations

This section is to be followed once the installation and set-up has been completed.

The topics covered are as follows:

Section Topic Instruction File
How to access Mongo DB and create the initial DB configurations mongo-connect-configure
Creating & uploading Studies and Surveys for the Influenzanet platform create-study-surveys
How to create and upload Email Templates to be sent out by the platform create-upload-emails
Setting up mailing service configurations mailing-configuration
Configuring layouts and pages in the web-ui web-ui-configuration

How to make changes and re-deploy

Any configuration, content, design changes or bug-fixes will require the service where the change has occurred to be re-deployed for it show up in the live version of the platform. This sections covers all the topics involved in making such changes on the fly with a running version of the platform.

Topics covered here are:

Section Topic Instruction File
Types of code changes change-types
Automated builds and re-deployment to Google cloud build-and-redeploy
Roll-back in case of errors rollback-errors

Maintenance Activities

Activites to be scheduled over the life-cycle of the Influenzanet-platform:

Section Topic Instruction File
Maintenance Activity checklist checklist
Issue resoution issue-resolution
Scaling resource allocations to cope with loads scaling-resources

About

A guide to configure and install the different services that are a part of the Infectieradar platform. Installation is currently described for the Google Kubernetes Engine infrastructure.

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