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KamilSJaron / smudgeplot Public

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BGA23

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Kamil S. Jaron edited this page Sep 7, 2023 · 1 revision

This tutorial is done for Biodiversity Genomics Academy 2023. Giving a 2h walkthrough of smudgeplot.

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Wiki pages Pages 21

Home
1n estimation: subsets
BGA23
BGA24
chosing L and U
estimate from the highest peak
everything about input data
FAQ
idea
joint interpretation of smudgeplot and GenomeScope
manual of smudgeplot with jellyfish
mapping kmers with bwa
smudgeplot all
smudgeplot cutoff
smudgeplot extract
smudgeplot hetmers
smudgeplot map
smudgeplot plot
strawberry tutorial
tutorial saccharomyces
tutorial strawberry

Smudgeplot components

smudgeplot hetmers
smudgeplot all
smudgeplot extract

Tutorials

tutorial saccharomyces
tutorial strawberry

Some potentially useful details

everything about input data
FAQ
Joint interpretation of Smudgeplot and GenomeScope

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