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GSOC#2

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Apprentice2907 wants to merge 9 commits into
KatyEB:GSoCfrom
Apprentice2907:GSoC
Open

GSOC#2
Apprentice2907 wants to merge 9 commits into
KatyEB:GSoCfrom
Apprentice2907:GSoC

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@Apprentice2907
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This PR contains my implementation of the PREDICT2 radiomics pipeline for calcium phenotype discovery.

Key Contributions:

  • Extracted 107 radiomic features using PyRadiomics
  • Computed Agatston scores from calcium segmentation masks
  • Performed statistical analysis (Spearman + Kruskal-Wallis)
  • Applied PCA + KMeans clustering (best K=2)
  • Built feature importance model using Random Forest + SHAP

Results:

  • 81/107 features significantly correlated with Agatston score
  • 76/107 features significant across calcium categories
  • Clustering aligns with calcium burden (Minimal vs Mild)

Repository:

https://github.com/Apprentice2907/PrediCT/tree/GSoC/predict2

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2 participants