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MPUSP / snakemake-assembly-postprocessing Public

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feat: added ntSynt and ntSynt-viz for synteny analysis + bug fix#16

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rabioinf wants to merge 9 commits into

mainMPUSP/snakemake-assembly-postprocessing:mainfrom

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Conversation Commits9 (9)Checks Files changed

Open

feat: added ntSynt and ntSynt-viz for synteny analysis + bug fix#16
rabioinf wants to merge 9 commits into
mainfrom
dev

Commits

Commits on Apr 22, 2026

chore: fix typo.
rabioinf
committed
fix: update bakta version.
rabioinf
committed
feat: add synteny anlaysis and viz using ntSynt
rabioinf
committed
fix: minor change in config
rabioinf
committed
chore: update ref in README
rabioinf
committed

Commits on Apr 23, 2026

fix: forgot 'extra' parameter in synteny detection.
rabioinf
committed
fix: add ref to synteny if defined in config; added ref_sequence for testing; closes #17
rabioinf
committed
fix: remove prefix param; closes #18
rabioinf
committed
feat: add checkM tool; closes #14
rabioinf
committed

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