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Scipy error when using process_kmer_to_graph.py script

Status: Open.

#102 In Magdoll/Cogent;

· FarrahKhan1400 opened on Apr 1, 2022

get_bad_or_unmapped_hq.py

Status: Open.

#101 In Magdoll/Cogent;

· NahlaHu opened on Mar 31, 2022

Sanity check failed by "filter_away_subset.py"

Status: Open.

#100 In Magdoll/Cogent;

· unique379r opened on Mar 8, 2022

run_preCluster.py --cpus=30 CalledProcessError(retcode, cmd)

Status: Open.

#98 In Magdoll/Cogent;

· bijendrabio opened on Jan 21, 2022

First sequence in unassigned.list is formated wrong for get_seqs_from_list.py

Status: Open.

#93 In Magdoll/Cogent;

· LionOfComarre opened on Mar 17, 2021

When running cogent, most of sequences ended up being in the tucked category

Status: Open.

#92 In Magdoll/Cogent;

· mprotas69 opened on Jan 28, 2021

tally_Cogent_contigs_per_family.py error

Status: Open.

#91 In Magdoll/Cogent;

· jodithea opened on Jan 12, 2021

Raise CycleDetectedException

Status: Open.

#89 In Magdoll/Cogent;

· shri1984 opened on Nov 5, 2020

"segmentation error" running reconstruct_contig.py - version 6.1.0

Status: Open.

#85 In Magdoll/Cogent;

· jcleple33 opened on Sep 10, 2020

execution error with reconstruct_contig.py FileNotFoundError: [Errno 2] No such file or directory

Status: Open.

#83 In Magdoll/Cogent;

· jcleple33 opened on Aug 24, 2020

Will I able to run Cogent on RNAspades output?

Status: Open.

#81 In Magdoll/Cogent;

· maorkn opened on Mar 28, 2020

Getting unassigned sequence IDs

Status: Open.

#80 In Magdoll/Cogent;

· bruvellu opened on Mar 26, 2020