Code for mutation accumulation under high Ud
To start use
conda env create --file HighUd_env.yml
to create the environment to work on this file
PfixDFE.ipynb has functions to calculate the rate of mutation accumulation for population genetic models. Then it compares the theoretical prediction to simulated data
findfixedmut.ipynb calculates the CDF of mutations that fix during simulations and compares it with theoretical expectation. It also calculates the load for a simulated population.