Workshop materials for modeling pipelines in stratigraphic paleobiology using the StratPal package
This is an open educational resource (OER). It contains materials for 3 to 4 h workshop for modeling stratigraphic paleobiology in R. Provided materials are slides providing a theoretical background for the participants, task for the participants, coding cheat sheets with template code, and solutions.
Niklas Hohmann
Utrecht University
email: n.h.hohmann [at] uu.nl
Web page: www.uu.nl/staff/NHohmann
ORCID: 0000-0003-1559-1838
Emilia Jarochowska
Utrecht University
email: e.b.jarochowska [at] uu.nl
Web page: www.uu.nl/staff/EBJarochowska
ORCID: 0000-0001-8937-9405
Xianyi Liu
Utrecht University
email: x.liu6 [at] uu.nl
Web page: www.uu.nl/staff/XLiu6
ORCID: 0000-0002-3851-116X
Thanks to Joël Koelewijn (ORCID: 0000-0002-4668-3797) for helping out with the workshop at the annual meeting of the Paleontological Association 2025 in Portsmouth, UK.
Copyright 2023-2024 Netherlands eScience Center and Utrecht University
Code in this repository is published under an Apache 2.0 License, see LICENSE file for full license text. All text and figures (with the exception of the figure taken from Patzkowsky and Holland (2012)) are published under a CC-BY 4.0 License.
- figs: folder for figures
- pres: folder with slides for presentation
- refs: references for materials
- solutions: solutions for the task
- tasks: workshop tasks for the participants
- .gitignore: untracked files
- LICENSE: Apache 2.0 License text
- README: Readme file
- StratPal_workshop_materials.Rproj: Rproject file
This repository uses material from
- Hohmann, Niklas. 2024. "StratPal: R package for stratigraphic paleobiology modeling pipelines (v0.1.0)." Zenodo. https://doi.org/10.5281/zenodo.12790995.
The figure figs/PatzkowskyHolland_5-4.png is from
- Patzkowsky, Mark E., and Steven M. Holland. 2019. "Stratigraphic paleobiology: understanding the distribution of fossil taxa in time and space." University of Chicago Press.
To cite these materials, please use
- Hohmann, N., Liu, X., & Jarochowska, E. (2024). Materials for workshop on building modeling pipelines in stratigraphic paleobiology (v1.0.0). Zenodo. https://doi.org/10.5281/zenodo.13769443
Funded by the European Union (ERC, MindTheGap, StG project no 101041077). Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council. Neither the European Union nor the granting authority can be held responsible for them.
