GEOPY-2741: update to Python 3.12

.github/workflows/python_analysis.yml

@@ -33,7 +33,7 @@ jobs:
     with:
       package-manager: 'poetry'
       app-name: 'las_geoh5'
-      python-version: '3.10'
+      python-version: '3.12'
   call-workflow-pytest:
     name: Pytest
     uses: MiraGeoscience/CI-tools/.github/workflows/reusable-python-pytest.yml@v2
@@ -42,10 +42,10 @@ jobs:
       pull-requests: read
     with:
       package-manager: 'poetry'
-      python-versions: '["3.10", "3.11", "3.12"]'
+      python-versions: '["3.12", "3.13", "3.14"]'
       os: '["ubuntu-latest", "windows-latest"]'
       cache-number: 1
-      codecov-reference-python-version: '3.10'
+      codecov-reference-python-version: '3.12'
       codecov-reference-os: '["windows-latest"]'
     secrets:
       CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

.github/workflows/python_deploy_dev.yml

@@ -19,7 +19,7 @@ jobs:
       contents: write
     with:
       package-name: 'las-geoh5'
-      python-version: '3.10'
+      python-version: '3.12'
       source-repo-names: '["public-noremote-conda-dev"]'
       conda-channels: '["conda-forge"]'
       publish-repo-names: '["public-noremote-conda-dev"]'
@@ -35,7 +35,7 @@ jobs:
       package-manager: 'poetry'
       package-name: 'las-geoh5'
       version-tag: ${{ github.ref_name }}
-      python-version: '3.10'
+      python-version: '3.12'
       virtual-repo-names: '["public-pypi-dev", "test-pypi"]'
     secrets:
       JFROG_ARTIFACTORY_URL: ${{ secrets.JFROG_ARTIFACTORY_URL }}

.pre-commit-config.yaml

@@ -17,7 +17,7 @@ repos:
     -   id: poetry-check
         args: [--lock, --no-plugins]
 -   repo: https://github.com/hadialqattan/pycln
-    rev: v2.5.0
+    rev: v2.6.0
     hooks:
     -   id: pycln
         args: [--config=pyproject.toml]
@@ -35,8 +35,8 @@ repos:
     hooks:
     -   id: mypy
         additional_dependencies: [
-            numpy==1.26.*,
-            pydantic==2.5.*,
+            numpy==2.4.*,
+            pydantic==2.12.*,
             tomli,  # to read config from pyproject.toml
             types-toml,
             types-PyYAML,

README.rst

@@ -142,4 +142,4 @@ Third Party Software notices and/or additional terms and conditions are located
 Copyright
 ---------
 
-Copyright (c) 2026 Mira Geoscience
+Copyright (c) 2024-2026 Mira Geoscience

docs/environment.yml

@@ -4,7 +4,7 @@ channels:
   - conda-forge
   - defaults
 dependencies:
-  - python=3.10
+  - python=3.12
   - pip
   - pip:
     - sphinx

docs/source/index.rst

@@ -69,4 +69,4 @@ Third Party Software notices and/or additional terms and conditions are located
 
 Copyright
 ^^^^^^^^^
-Copyright (c) 2024 Mira Geoscience Ltd.
+Copyright (c) 2023-2026 Mira Geoscience Ltd.

package.rst

@@ -9,7 +9,7 @@ and a ui.json that parameterizes the driver and renders a UI for use within `Geo
 
 Installation
 ^^^^^^^^^^^^
-**las-geoh5** is currently written for Python 3.10 or higher.
+**las-geoh5** is currently written for Python 3.12–3.14.
 
 Install **las-geoh5** from PyPI::
 
@@ -62,4 +62,4 @@ Third Party Software notices and/or additional terms and conditions are located
 
 Copyright
 ^^^^^^^^^
-Copyright (c) 2026 Mira Geoscience Ltd.
+Copyright (c) 2023-2026 Mira Geoscience Ltd.

pyproject.toml

@@ -13,7 +13,7 @@ build-backend = "poetry_dynamic_versioning.backend"
 
 [project]
 name = "las-geoh5"
-requires-python = ">=3.10,<4.0"
+requires-python = ">=3.12,<3.15"
 
 description = "Las/Geoh5 conversion"
 license = "MIT"
@@ -65,9 +65,9 @@ version = "0.0.0.dev0"
 
 
 [tool.poetry.dependencies]
-lasio = "0.31.*"
-numpy = "~1.26.0"  # also in geoh5py
-pydantic = "^2.5.2"  # also in geoh5py
+lasio = "0.32.*"
+numpy = "~2.4.0"
+pydantic = "~2.12.0"
 tqdm = "^4.66.1"
 
 ## dependencies from Git repositories
@@ -116,7 +116,7 @@ initial-content = """
 persistent-substitution = true
 
 [tool.ruff]
-target-version = "py310"
+target-version = "py312"
 
 [tool.ruff.lint]
 ignore = [
@@ -161,7 +161,6 @@ show_column_numbers = true
 check_untyped_defs = true
 
 plugins = [
-    "numpy.typing.mypy_plugin",
     "pydantic.mypy",
 ]
 

recipe.yaml

@@ -3,7 +3,7 @@ schema_version: 1
 context:
   name: "las-geoh5"
   version: "0.0.0.dev0"  # This will be replaced by the actual version in the build process
-  python_min: "3.10"
+  python_min: "3.12"
   module_name: ${{ name|lower|replace("-", "_") }}
 
 package:
@@ -27,19 +27,19 @@ build:
 requirements:
   host:
     - pip
-    - python 3.10.*
+    - python ${{ python_min }}.*
     - poetry-core >=1.8.0
     - poetry-dynamic-versioning >=1.9, 1.*
     - setuptools
     - setuptools_scm
   run:
-    - python >=${{ python_min }}
+    - python >=${{ python_min }},<3.15
     # Mira packages
-    - geoh5py >=0.12.0b5, 0.12.*
+    - geoh5py >=0.13.0a2, 0.13.*
     # direct dependencies
     - lasio 0.31.*
-    - numpy 1.26.*
-    - pydantic >=2.5.2, 2.*
+    - numpy >=2.4.0, 2.4.*
+    - pydantic 2.12.*
     - tqdm >=4.66.1, 4.*
 
 tests:

tests/import_las_test.py

@@ -506,7 +506,7 @@ def test_handle_no_group(tmp_path: Path):
     module.run(filepath)
 
     with Workspace(tmp_path / "import.geoh5") as workspace:
-        dh_group = workspace.get_entity("Drillhole Group")[0]
+        dh_group = workspace.get_entity("Drillholes")[0]
         assert "123" in [k.name for k in dh_group.children]
 
 

zizmor.yml

@@ -1 +1,5 @@
 rules:
+  unpinned-uses:
+    config:
+      policies:
+        MiraGeoscience/*: any