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[WIP] Fix Nextflow file location errors with relative paths - #2

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Pablo1990 with Copilot wants to merge 1 commit into
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copilot/fix-nextflow-relative-paths
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[WIP] Fix Nextflow file location errors with relative paths#2
Pablo1990 with Copilot wants to merge 1 commit into
mainfrom
copilot/fix-nextflow-relative-paths

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