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1. AlphaFold-DB AlphaFold-DB Public

   Fix Database problem for AlphaFold by updating some databases.

   Shell 4 1

2. CUTRUN_smk CUTRUN_smk Public

   Snakemake workflow for analyzing CUT&RUN/ChIP-seq data.

   Python 1 1

3. NCBI_sra_download NCBI_sra_download Public

   A Bash script for downloading sequencing data from the NCBI SRA database.

   Shell 1

4. GRIP-seq_smk GRIP-seq_smk Public

   GRIP-seq Snakemake Workflow

   Python

5. circRNA_smk circRNA_smk Public

   Snakemake workflow for analyzing circular RNA from PE ribo-depleted RNA-seq data.

   Python

6. Micro-C_smk Micro-C_smk Public

   Snakemake workflow for analyzing Micro-C data.

   Python