Release 2026.0.0 #614
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Release 2026.0.0 #614
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…ecting users to original planning page after sign in.
…stelle/573/uploadYourDataButton
…YourDataButton Add upload your data section on Home page
…xp and Edit Exp pages.
…chAssControlledKeywords Add molecular mechanism assessed controlled keywords to both Create Exp and Edit Exp pages.
…ReadIdentifierToScoresetPage Add Raw Read Identifier link to scoreset page.
Multiple pages and components were impacted by the upgrade to PriveVue 4. These changes are to help restore the look and feel of those prior to the upgrade. This includes the use of the theme.css file that is specific to PrimeVue 3 to maintain consistency with CSS classes already in use throughout the application. Going forward, PrimeVue 3 specific class names should be phased out in favor of PrimeVue 4 Aura theme and tailwind CSS plus any additional custom classes that are needed.
…ue 4 PrimeVue 4 upgrade impacted styling on DashboardView page, so these changes are to match the look and feel prior to the upgrade. Also adds a progress spinner that is displayed when searching published score sets.
… to PrimeVue4 and tailwindCSS Additional changes to CSS and ScoreSetCreator, ScoreSetEditor, ScoreSetView components that were impacted by the upgrade to PriveVue 4. These changes are to help restore the look and feel of those prior to the upgrade.
…coreSetTableSize Make the search result data table bigger
Replacing deprecated TabView with PrimeVue 4's Tabs components to ensure initial value is being set. Reformatting to address formatting, attribute order and hyphenation warnings from linter. Replacing custom CSS classes with tailwindCSS equivalents.
…th Select on MaveMD page
…imeVue 3 functionality There are several breaking changes with the migration to PrimeVue4 related to deprecation of the Chips component and differences in AutoComplete component. This commit adds custom CSS and updates the ExperimentCreator component to mimic the functionality and style associated with these component in PrimeVue 3.
…me-from-nav-bar chore: remove home link from toolbar
…-tooltip-covers-interactive-elements feat: Treat visualization tooltips more like overlay panels
…n linkifyTextHtml function
…gvf-linkout feat: handle IGVF external links
…y-clickable-mavemd-links feat: Directly clickable MaveMD links
…-calibrations Categorical Calibration Support
…esponding protein visualization data based on residue position rather than index
…to corresponding X scale domain values
…r heatmap starting at position 2
…with no assigned score
…m null scores having no color and showing white background
…top of other elements when in full screen mode
…xist within target range
…ng mapped coordinates
… off-white pivot color used in color scale This is to address the issue of heatmap cells with near-baseline scores appearing the same as those with no data. This also changes removes the background color on the heatmap controls element, instead using a top and bottom border, for less of a visual break between the content above and below the controls.
…value is present for current colorBy attribute
… selection rectangles when selection is out of range Stores min and max X in heatmap content object, to use when selecting a column range is outside of these values. This can occur when selecting residues in a protein visualization that do not appear in the heatmap, and in these cases it will no longer create a selection rectangle rather than defaulting to the first column.
…ost-mapped HGVS coordinates or if scoreset is accession-based
…ixes Protein Visualization and Heatmap Fixes
Hides incomplete pages from documentation index and rebuilds docs. The documentation state in this commit is intended to provide an MVP docs refresh. See #609 for additional documentation pages.
…r-release-2026.0.0 Scoped docs for release 2026.0.0
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[todo]