Rotation_2020

Spring rotation project slim simulation of host & virus interaction.

Name		Name	Last commit message	Last commit date
Latest commit History 31 Commits
bias_py_files		bias_py_files
bias_test_data		bias_test_data
cut		cut
cut_old		cut_old
data		data
figures		figures
old data		old data
raw_data		raw_data
test files		test files
.DS_Store		.DS_Store
.gitignore		.gitignore
README.md		README.md
Rotation_2020.Rproj		Rotation_2020.Rproj
SIR.slim		SIR.slim
dichotomy.R		dichotomy.R
dichotomy_2d.R		dichotomy_2d.R
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_1.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_1.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_10.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_10.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_2.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_2.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_3.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_3.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_4.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_4.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_5.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_5.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_6.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_6.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_7.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_7.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_8.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_8.txt
exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_9.txt		exp_K_10000_hK_10000_sigma_K_1.0_sigma_C_0.4_trial_9.txt
exp_K_1000_hK_100_sigma_K_1.0_sigma_C_0.4_trial_2.txt		exp_K_1000_hK_100_sigma_K_1.0_sigma_C_0.4_trial_2.txt
graph.R		graph.R
large_effect.slim		large_effect.slim
lesson 16a.slim		lesson 16a.slim
lesson10.slim		lesson10.slim
lesson11.slim		lesson11.slim
lesson12p1.slim		lesson12p1.slim
lesson12p2.slim		lesson12p2.slim
lesson13.slim		lesson13.slim
lesson14.slim		lesson14.slim
lesson15a.slim		lesson15a.slim
lesson15b.slim		lesson15b.slim
lesson16b.slim		lesson16b.slim
lesson17a.slim		lesson17a.slim
lesson17b.slim		lesson17b.slim
lesson18.slim		lesson18.slim
lesson19.slim		lesson19.slim
lesson5.slim		lesson5.slim
lesson6recombo.slim		lesson6recombo.slim
lesson9.slim		lesson9.slim
making nice pngs.R		making nice pngs.R
model_output.txt		model_output.txt
phe_sel_virus_n_host.slim		phe_sel_virus_n_host.slim
phe_sel_virus_n_host_2d.slim		phe_sel_virus_n_host_2d.slim
pi_vs_pheno_fig.R		pi_vs_pheno_fig.R
sel_example1.slim		sel_example1.slim
sel_example2.slim		sel_example2.slim
sel_virus_n_host.slim		sel_virus_n_host.slim
slim8.slim		slim8.slim
slim_test.slim		slim_test.slim
test2d copy.txt		test2d copy.txt
test2d.txt		test2d.txt
tree_test.trees		tree_test.trees
virus_n_host.slim		virus_n_host.slim
ws2.slim		ws2.slim

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