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Releases: ZhangLab-Kiz/DeepCellSeek

DeepCellSeek v1.0.0: Initial Release

09 Mar 11:12
@ZhangLab-Kiz ZhangLab-Kiz
v1.0.0
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DeepCellSeek v1.0.0: Initial Release Latest
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We are thrilled to announce the official release of DeepCellSeek v1.0.0! 🎉

DeepCellSeek is a comprehensive R package that leverages Large Language Models (LLMs) to provide accurate cell type and subtype annotations for single-cell RNA-sequencing (scRNA-seq) data.

✨ Major Features in v1.0.0

  • Dual Architecture: Flexible deployment with both free gateway and local direct API access.
  • Multi-Model Integration: Support for industry-leading models including OpenAI GPT, Claude, DeepSeek, Gemini, Grok, Kimi, and Doubao.
  • Ensemble Voting Mechanism: Advanced consensus algorithms to significantly improve annotation accuracy and reduce AI hallucinations.
  • Comprehensive Coverage: Ready-to-use functions for both broad cell type and fine-grained subtype annotations.
  • Seamless Seurat Integration: Directly accepts FindAllMarkers output for rapid pipeline integration.

📚 Documentation

For complete installation instructions and R package tutorials, please refer to our README. If you prefer a ready-to-use graphical interface without installation, please visit our web platform at https://deepcellseek.kiz.ac.cn/.

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