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Fixing bug in filter_missval(): Error in .SummarizedExperiment.charbound(i, rownames(x), fmt): <SummarizedExperiment>[i,] index out of bounds: 10 100 ... 9998 9999 Traceback: 1. DEP::filter_missval(data_se, thr = 1) 2. se[keep$rowname, ] 3. se[keep$rowname, ] 4. .SummarizedExperiment.charbound(i, rownames(x), fmt) 5. stop(sprintf(fmt, msg))
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Fixing bug in filter_missval():
keep$rowname is vector of character strings but should be row index, hence turned to integer.
Error in .SummarizedExperiment.charbound(i, rownames(x), fmt): [i,] index out of bounds: 10 100 ... 9998 9999 Traceback: