v2.0.1 -- and finally get a stable main - #216

Merged

ofloveandhate merged 1056 commits into

mainfrom

May 18, 2026

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Commits on Mar 25, 2026

♻️ refactor: specified template argument in SetCauchySettings method
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de554c7
🔧 chore: updated build configuration for PyPI publishing with Ninja generator
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d6d07cb

Commits on Mar 26, 2026

🔧 chore: fix duplicate TOML key in scikit-build cmake config

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6ce22a5
🐛 fix: prevent second find_package(Boost) from overwriting Boost_LIBRARIES

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7541494
🐛 fix: disable Doxygen discovery in wheel builds

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c4a325a
🔧 chore: add openblas-devel to dependencies in build configuration
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f8ea129
🔧 chore: remove openblas-devel from dependencies in build configuration
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914076e
🐛 fix: add --no-deps to Linux pip wheel to skip eigenpy PyPI build

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de99bd4
🐛 fix: move EIGEN_MAKE_ALIGNED_OPERATOR_NEW to public section in System class

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2f23d84
🔧 fix: update tar command options for boost and eigenpy extraction
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8304b96
♻️ refactor: restructure manylinux build to fix multiple issues

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f501adb
🐛 fix: pin Boost.Python build to target Python version on manylinux

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9aa6b66
♻️ refactor: streamline manylinux build process for multiple Python versions
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73c4696
🐛 fix: pass Python executable path, not bin directory, to eigenpy cmake

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512c1c9
🐛 fix: Linux wheel build auditwheel and shell escaping issues

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e7f357b
✨ feat: add initial CMake configuration and progress tracking files
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e1c1510

Commits on Mar 27, 2026

🔖 chore: bump version to 1.0.4

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update develop with ci branch (#1)

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chore: include 'tag' for release

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chore: add CHANGELOG.md

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chore: bump to v1.0.1

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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chore: bump to v1.0.2

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fix: make compatible for llvm clang 4.0 spec

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chore: add bigobj for msvc option

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chore: add bigobj for msvc option

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chore: add config:Release for windows

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chore: bump to 1.0.3

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chore: use Release libraries for linking in windows

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chore: use Release libraries for linking in windows

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chore: use only linux and macosx

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chore: use only linux and macosx

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chore: use only linux and macosx

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chore: use only linux and macosx

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chore: use only linux and macosx

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chore: use only linux and macosx

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chore: use only linux and macosx

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chore: use only linux and macosx

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Simple test (#2)

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🔧 chore: expanded CI matrix with Windows, Python 3.9/3.12, manylinux
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`🔧 chore: simplified CI matrix to Python 3.12 only across all OS`
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4644391
🔧 chore: updated CI matrix to use Python 3.11.12 across all OS
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88543c6
🔧 chore: added CMAKE_PREFIX_PATH for Homebrew Boost in CI build
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🔧 chore: updated Boost to v1.87 and removed `CMAKE_PREFIX_PATH` in CI
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b95b684
🔧 chore: downgraded Boost from v1.87 to v1.85 in macOS CI build
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🔧 chore: removed version pin for `boost-python3` in macOS CI
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🔧 chore: added `boost@1.85` linking and CMAKE path for macOS CI
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🔧 chore: removed `brew link boost@1.85` from macOS CI workflow
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fe70d56
🔧 chore: updated macOS CI to use `eigen@3` instead of `eigen`
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07180bf
🔧 chore: updated macOS CI to use `eigen` and `boost` packages
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🔧 chore: added conditional `boost_system` for Boost < 1.89.0
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ae00033
🔧 chore: added conditional `boost_system` for Boost < 1.89.0
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d4302c4
🔧 chore: pinned Eigen to v3.3 and updated brew install to `eigen@3`
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a507520
🔧 chore: updated Windows build script to use pwsh and improved boost patching
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138650a
🔧 chore: updated Eigen3 version requirement to 3.3...3.4 in CMakeLists.txt
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47d091b
🔧 chore: removed specific version requirement for Eigen3 in CMakeLists.txt
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af42314
🔧 chore: removed Eigen 3.2.x workaround for Boost.Multiprecision
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9245cef
🔧 chore: updated build configuration for PyPI publishing with Ninja generator
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0b4436a
🔧 chore: fix duplicate TOML key in scikit-build cmake config

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5169c58
🐛 fix: prevent second find_package(Boost) from overwriting Boost_LIBRARIES

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11381f7
🐛 fix: disable Doxygen discovery in wheel builds

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5087f70
🔧 chore: add openblas-devel to dependencies in build configuration
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acf16ae
🔧 chore: remove openblas-devel from dependencies in build configuration
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38a68fa
🐛 fix: add --no-deps to Linux pip wheel to skip eigenpy PyPI build

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76a431f
🐛 fix: move EIGEN_MAKE_ALIGNED_OPERATOR_NEW to public section in System class

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95c8ed5
🔧 fix: update tar command options for boost and eigenpy extraction
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23f866a
♻️ refactor: restructure manylinux build to fix multiple issues

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c46f7a5
🐛 fix: pin Boost.Python build to target Python version on manylinux

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7318b9d
♻️ refactor: streamline manylinux build process for multiple Python versions
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dcbab00
🐛 fix: pass Python executable path, not bin directory, to eigenpy cmake

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8a43aea
🐛 fix: Linux wheel build auditwheel and shell escaping issues

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b29f291
✨ feat: add initial CMake configuration and progress tracking files
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5aa2113
🔖 chore: bump version to 1.0.4

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00a3e28
♻️ refactor: format CMakeLists.txt for improved readability and consistency
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9eda5e6
✨ feat: enable unit testing option and set default build type to Release
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35b514f
🐛 fix: enable python_bindings build and fix Linux manylinux workflow

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7aa30d1
♻️ refactor: use cibuildwheel for Linux multi-version wheel builds

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6843e25
🐛 fix: conditionally link boost_system in python_bindings for Boost >= 1.89

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60f489e
♻️ refactor: use cibuildwheel pattern for Linux and macOS builds

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d09f51e
🐛 fix: always create _pybertini target, not only when top-level project

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46aa3d6
♻️ refactor: separate macOS build from cibuildwheel, use setup-python

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cd2394e
♻️ refactor: consolidate build jobs for Linux and macOS in CI workflow
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1b6c7b0
🐛 fix: use _pybertini target name in target_link_boost_python call

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ea2f336
🐛 fix: set MACOSX_DEPLOYMENT_TARGET=14.0 for macOS wheel builds

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be5fa75
🐛 fix: install numpy before eigenpy build in CIBW_BEFORE_ALL_LINUX

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d1054b4
🔧 fix: install scikit-build-core, numpy, and scipy before eigenpy build
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ac39928
🐛 fix: remove scipy from CIBW_BEFORE_BUILD

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🐛 fix: skip i686 builds in cibuildwheel

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e1a626a
🐛 fix: register DLL search paths on Windows before importing _pybertini

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e575548
🔖 chore: bump version to 1.0.5

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8f3a219
🔧 chore: build Windows wheels for Python 3.9, 3.10, 3.11, 3.12

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2324ac1
🔧 chore: remove Python 3.12 from Windows build matrix

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70d40ad
✨ feat: add DLL path management for Windows in windows_dll_manager.py
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5190bda
📚 docs: correct spelling errors in README.md
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80478c2
📚 docs: correct spelling errors in README.md
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e313058
📚 docs: update installation instructions for pybertini in README.md
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84a0c81
🔖 chore: bump version to 1.0.6 in _version.py and pyproject.toml
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fd64f3a
✨ feat: enhance DLL path management in windows_dll_manager.py
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c82c786
✨ feat: enhance wheel building process with delvewheel integration
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a40817c
🔖 chore: bump version to 1.0.7 with delvewheel DLL bundling for Windows

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91b10ce
🔧 fix: update wheel publishing process in build-and-publish-to-pypi.yml
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1a5382b
🔖 chore: bump version to 1.0.8, fix delvewheel output directory

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722facb
🔧 fix: remove unused dependency 'eigenpy' from pyproject.toml
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🔖 chore: bump version to 1.0.9, remove eigenpy from pip dependencies

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910b3c7

Commits on Mar 28, 2026

📚 docs: update README with wheel details for Windows and Python 3.12
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bcf1a1d

Commits on Mar 31, 2026

✨ feat: add 'compilers' to Windows environment configuration
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70958fe
✨ feat: add /EHsc compile option for MSVC in CMakeLists.txt
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7c35289
ignore the `bld/` directory
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b4fd722
using `SYSTEM` on external libraries, so warnings from THIS library
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9423c05
remove upper limit on python version
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7b60790
Merge branch 'develop' of https://github.com/hkmoon/b2 into pr/212
ofloveandhate
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9ce1b5f
added an environment which worked on my mac
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3ea9148

Commits on Apr 1, 2026

Commits on Apr 2, 2026

Commits on Apr 8, 2026

Commits on Apr 9, 2026

Commits on Apr 13, 2026

♻️ refactor: enhance type casting and conversion in mpfr_export.cpp
hkmoon
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79a4ccb

Commits on Apr 14, 2026

Commits on Apr 21, 2026

Add GitHub Actions workflow for GitLab sync
ofloveandhate
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c4c8ff4
Update gitlab-sync action to version 2.2.1
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c077d06
deleted __init__.py for tests
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a078a49

Commits on Apr 22, 2026

ignoring more generated files
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00a9ae2
♻️ refactor: update GitHub Actions workflow for improved caching and testing
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7765c0b
let me see the python doc makefile in sublime
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1d36bb7
updated the location for built python extension
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7c94b70
📝 removed some navigation. resolved duplicate labeling
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📝 renamed file, fixed reference
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Merge branch 'develop' of https://github.com/hkmoon/b2 into pr/212
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Commits on Apr 23, 2026

📝 Significant documentation improvements
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ecd5491
made `precision` a property
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f2cd0ea
📝 named a bunch of arguments. caught a bug along the way!
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d90728c
⚰️ Removed old make file
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4e79992
♻️ refactor(fix tests): replace member function pointers with static methods in mpfr_export
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72f89f6
♻️ refactor: update Python versions in CI configuration for compatibility
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d4a5374
♻️ refactor: streamline Python configuration in CI for Boost and Eigenpy
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918933f
♻️ refactor: update Python versions in CI configuration for testing
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da13025
♻️ refactor: simplify CI configuration and update Python version matrix
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76acfd2
♻️ refactor: enhance CI configuration by adding caching for dependencies
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724d1b4
🐛 precision adjustment
ofloveandhate
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ebbd6b3
♻️ refactor: improve CI configuration by enhancing caching for dependencies
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57466a5
Merge branch 'develop' of https://github.com/hkmoon/b2 into pr/212
ofloveandhate
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46afe81
♻️ refactor: simplify CI configuration by removing unnecessary caching paths
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d1fb88e
♻️ refactor: enhance CI configuration for building Boost with Python support
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642b991
♻️ refactor: clarify comments in CI configuration for Boost.Python build
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0d61dda
♻️ refactor: update CI configuration to include scipy in dependencies
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0861c4d
i want debugger symbols in release mode
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702269d
print message about where will install the built bindings, when not using scikit
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5bf74fc

Commits on Apr 24, 2026

♻️ refactor: remove unnecessary boost installation from CI configuration
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39c6bb8
♻️ refactor: update Boost.Python build configuration to use python3
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ef74f82
♻️ refactor: update Boost.Python installation command to include hardcoded DLL paths
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ce1c018
♻️ refactor: update precision access in tests and export to use method calls due to windows test error
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5f0cb36
♻️ refactor: streamline precision handling in endgame tests for consistency for windows tests
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3e4cd17
♻️ refactor: update pip install command to use --no-index for clarity
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3380d30
♻️ refactor: streamline precision handling in endgame tests for consistency
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e1a4c16
♻️ refactor: unify precision method exposure in PrecisionVisitor for consistency
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9b7b954
♻️ revert: reset all the changes to the original commit
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19db692
♻️ refactor: unify precision handling across platforms in tests
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5902feb
✅ test: skip Windows platform for AMPCauchyEG in endgame tests
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51589e5
♻️ refactor: remove _set_prec function and adjust precision handling in tests
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6cca04d
♻️ refactor: simplify caching and build steps in CI configuration
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1f3dccf

Commits on Apr 27, 2026

Merge branch 'develop' of https://github.com/hkmoon/b2 into pr/212
ofloveandhate
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a1a87e1
♻️ refactor: ensure thread-local precision consistency in mpfr_complex
HongKee Moon
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f1ec481
♻️ refactor: improve precision handling in mpfr_complex and tests
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4f2e951
🐛 fix(ci): rebuild Boost.Python and eigenpy per target Python on Linux
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bac6e5c
🐛 fix(ci): rebuild Boost.Python and eigenpy per target Python on macOS
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7f7909e
👷 ci: build and test cp39–cp313 wheels on macOS too
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57cc74c
🐛 fix(ci): install scipy for eigenpy configure
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aa6f14a
🐛 fix(ci): bump Linux manylinux image to manylinux_2_28
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17bcb97
🔧 fix(ci): update wheel installation command and set error on no files
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a74ca56
🐛 fix(ci): pre-install numpy before offline bertini install
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e33ad3d
fix: set thread default precision in DefaultPrecision method
hkmoon
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3111255

Commits on Apr 28, 2026

♻️ refactor(endgame_export): clean up whitespace and formatting
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44c1f96
♻️ refactor(mpfr_complex): revert to old implementation
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295d082
♻️ refactor(mpfr_export): clean up formatting and remove unused constructors
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d6406c5
♻️ refactor(endgame_export): simplify parameter passing in WrapRun methods
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38aa67e
♻️ refactor(endgame_test): remove Windows-specific skip from test case
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213f603

Commits on May 5, 2026

🙈 ignore yet more build folders
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edee176
📝 docs: add GitHub Pages site for C++ (Doxygen) and Python (Sphinx) (#5)

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ab83d2e
📝 added missing citation
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be5aeb2
⚡ optimize stepsize and precision in double, not multiple
ofloveandhate
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a32d2df
🎨 print both homogeneous and dehom solns in example
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8a7bb00
🔧 fix(ci): correct branch name for TestPyPI and PyPI publishing
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61196f8
Merge branch 'develop' of https://github.com/hkmoon/b2 into pr/212
ofloveandhate
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8aa51a2
Merge branch 'bertiniteam:develop' into develop
hkmoon
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9d2478a
🔥 deleted python doc on building
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5fff268

Commits on May 6, 2026

♻️ refactor(amp_tracker): adjust inline specifier for StepsizeSatisfyingCriterionB
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ef4ab2a

Commits on May 12, 2026

Commits on May 13, 2026

👷 I got unit testing working in the workflows on github.
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fa4f23d

Commits on May 15, 2026

👷 c++ testing. workflows split.
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ec1c148
set version number to get ready for a dev release
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49fb4f7
👷 make `MACOSX_DEPLOYMENT_TARGET` co-vary
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300a624
merged boost building back into consumer
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b179dee
🚧 working on version number unification
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59f5314
cmakelists reads version from pyproject.toml
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ae4b687
corrected boost version number
ofloveandhate
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7c8fdd6
also include gmp, mpfr, eigen versions
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05c2ff9
exposed version numbers into python
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stripped years from copyright in source
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a766398
make run only on the official repo
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35692fb

Commits on May 16, 2026

🙈 ignoring yet another possible build directory
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d7c92ce
🐛 fix(mpfr): seed thread_default_precision to avoid mpfr_init2 abort on Boost 1.87+

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✅ test(classes): pin down thread_default_precision invariants

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✅ test(system): mean tests for operator+= / operator*= surface stale-SLP bug

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🐛 fix(system): invalidate is_differentiated_ in operator+= and operator*=

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🐛 fix(system): invalidate cache in Reorder, Simplify, and ClearVariables

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57490dd
🐛 fix(bindings): robust thread_default_precision seed + eval overload order

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c75b00b
👷 ci: bump Boost from 1.87 to 1.90 in build_and_test.yml

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👷 ci: run full OS+Python matrix on PRs targeting develop

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cb40f9f
🐛 fix(system): seed thread_default_precision before SLP memory resize
ofloveandhate
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3bbab7d
👷 ci: drop macos-15-intel from the matrix
ofloveandhate
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d7fc5a0
📝 docs(changelog): add 2.0.1 release entry
ofloveandhate
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e72498c
Merge pull request #212 from hkmoon/develop
ofloveandhate
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1f9d4f1
👷 ci: run full matrix on PRs targeting main

ofloveandhate
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claude
committed
2c90bce
removed dead comment
ofloveandhate
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1be0096
Merge pull request #217 from bertiniteam/fix/full-matrix-for-main-prs
ofloveandhate
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b3f1666

Commits on May 17, 2026

👷 ci: strip debug symbols from bundled Linux deps to reduce wheel size

ofloveandhate
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claude
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77c0e7b
Merge pull request #218 from bertiniteam/fix/strip-dep-debug-symbols
ofloveandhate
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38eb767
👷 ci: fix docs workflow — pin eigenpy and enforce Sphinx warnings

ofloveandhate
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claude
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4cb97b9
Merge pull request #219 from bertiniteam/fix/docs-workflow
ofloveandhate
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4942268
👷 ci: improve Linux dep stripping to reduce manylinux wheel size

ofloveandhate
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claude
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3a23c66
👷 ci: fix strip flag — use --strip-debug to actually remove DWARF sections

ofloveandhate
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claude
committed
1e7861f

Commits on May 18, 2026