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New release#435

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ESCRI11 merged 110 commits intomainfrom
devel
Feb 5, 2026
Merged

New release#435
ESCRI11 merged 110 commits intomainfrom
devel

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@ESCRI11 ESCRI11 commented Feb 5, 2026

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ESCRI11 and others added 30 commits December 16, 2025 14:44
When orthogene::map_species fails or returns NULL, the function now
falls back to using the table method instead of failing. This improves
robustness when the gprofiler method is unavailable.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
fix: IA musst be checked as beginning of line
Fix #1644: when using 'symbol' as label prefix needed in wgcna heatmap
Playbase function to combine (sum) technical replicates in linear space.
Add error handling fallback in getOrthoSpecies function
Revert "adapt to new xgboost function call"
ESCRI11 and others added 29 commits January 21, 2026 14:14
New feature: regress out user-defined covariates
fix: add biomart mirror failover and improve ortholog mapping
feat: test csv and parquet olink data ingestion
feat: enhance volcano plot and multipartite graph plotting functions
fix ai.create_report on older pgx
Fix BC crash for y NULL or 1-level
 volcano editor: hyperbolic lines + ggprism options
@ESCRI11 ESCRI11 merged commit d5969a9 into main Feb 5, 2026
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3 participants