fix(GSE110554): correct metadata loading for samples GSM2998097 and GSM2998106#189
Merged
marcbal77 merged 2 commits intobio-learn:masterfrom Dec 9, 2025
Merged
Conversation
Member
Author
|
*not sure if corrections: fix_gse110554 in yaml is necessary upon review, working locally, but I think it's best practice to keep. |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
Closes #87
Changes
biolearn/corrections.pymodule with extensible correction registry (aiming for extensibility here)DataSourceto apply corrections after parsing, before cachingcorrections: fix_gse110554to GSE110554 entry in library.yaml