Skip to content

Katherine Soderberg's project outline #19

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
katherine-soderberg wants to merge 11 commits into
base: master
Choose a base branch
from
Open

Katherine Soderberg's project outline #19

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
11 commits
Select commit Hold shift + click to select a range
b2f9996
edit README to include project outline
katherine-soderberg Feb 28, 2020
7c5d788
update README with full description
katherine-soderberg Feb 28, 2020
760825d
turn repository into a package
katherine-soderberg Apr 9, 2020
16fd861
add setup.py
katherine-soderberg Apr 9, 2020
01c61ae
add spreadsheet of data
katherine-soderberg May 7, 2020
d34cf3a
update notebook with package writing content
katherine-soderberg May 7, 2020
bb245f3
update README with better description
katherine-soderberg May 7, 2020
4ecfb64
add filesummary script
katherine-soderberg May 7, 2020
f44ab8f
create data cleaning and outlier assessment module and update testing…
katherine-soderberg May 8, 2020
cd8cae0
update data cleaning and outlier assessment modules and demonstrate t…
katherine-soderberg May 8, 2020
d46868e
finalize outlier assessment module and add plot
katherine-soderberg May 8, 2020
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1,003 changes: 1,003 additions & 0 deletions .ipynb_checkpoints/Assembly-and-demo-checkpoint.ipynb
View file
Open in desktop

Large diffs are not rendered by default.

8 changes: 8 additions & 0 deletions .ipynb_checkpoints/README-checkpoint.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,8 @@
# Kathode's Package:

This is a package that can read in a table of data describing resting MRI scans and filter
by specific scanner metrics to perform automated quality control. It produces information
about which scans are high quality enough to proceed with processing.


To explore the utilities of the package with the available data spreadsheet, examine the output in the "Demonstrating the package with example spreadsheet" section of the Jupyter Notebook.
476 changes: 476 additions & 0 deletions .ipynb_checkpoints/restqclist.040220_KS-checkpoint.csv
View file
Open in desktop

Large diffs are not rendered by default.

Loading