Cellarium Workflows Example

This code contains helper functions and example to run scripts in Vertex AI platform (powered by Kubeflow)

Quick start

• Install gcloud CLI
• Authenticate gcloud CLI util
• Install project requirements like:

$ pip isntall -r requirements/base.txt

Example

Go to example dir

$ cd cellarium/workflows/example

Submit an example pipeline:

$  python submit_example_pipeline.py --project_id dsp-cell-annotation-service --location us-central1 --display_name test --component_1_config gs://test-bucket/test-config-1.yaml --component_2_config gs://test-bucket/test-config-2.yaml