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Test gh workflow#27

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cristinamullin wants to merge 8 commits into
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test-gh-workflow
Open

Test gh workflow#27
cristinamullin wants to merge 8 commits into
developfrom
test-gh-workflow

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Pull Request Checklist

Preparation

  • Update your branch from the latest develop and resolve any merge conflicts

  • Before creating a pull request trigger the format-update GitHub Action on your branch to format the code

Documentation

  • Add/update inline and/or block comments to clarify complexity, context and intent

  • Add/update function documentation (roxygen), include working examples, build docs locally using devtools::document(), and inspect added/updated help pages for content and format

  • Add/update vignettes for corresponding changes in functionality, list these under articles in _pkgdown.yml, and ensure added/updated vignettes run and build with proper formatting locally

Maintenance & Data Refresh

  • Add new dependencies to DESCRIPTION and document appropriately

  • Run spelling maintenance in requiredMaintenance.R

  • If changes affect other package or the shiny app functions, update those impacted functions accordingly

  • If columns were added/updated, add/update them in RequiredCols.R

  • Run .TADA_UpdateRefFiles() and .TADA_UpdateExampleData() locally via MaintenanceScheduled.R or trigger the Component File Update GitHub Action

  • If new example data files were added, document them in ExampleData.R and include them in MaintenanceScheduled.R for regular refresh

Tests and checks

  • Add/update tests in tests/testthat to cover changes

  • Run devtools::test() to verify new and existing tests pass

  • Run devtools::check() and address any errors, warnings or notes

Pull Request Description

  • Includes a summary of the changes made

  • Includes relevant context/motivation

  • Includes links to related issues or pull requests (keywords like "Closes #issue_number" automatically close related issues when pull request is merged)

Review

  • Review the bot-commented coverage-report generated by test-coverage to confirm all changes are covered by tests

  • Review/accept any bot-suggested format changes

  • Request review from at least one developer team member

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Spelling check failed. Details:

Spelling check failed. Found 1 potential misspelling(s). Note: If a word is acceptable project terminology, add it to WORDLIST.

  WORD           FOUND IN
Automatetttd   README.md:9

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coverage-report

File Coverage Missing
All files 48%
R/ATTAINSCrosswalks.R 24% 32-868 1074-1089 1093-1097 1102-1107 1112 1118-1131 1137-1140 1145-1166 1177-1192 1413-1469 1476-1739 1923-1935 1939-1942 1947 1975-1978 1990-1993 2001-2005 2021-2025 2041-2047 2055-2070 2075 2081-2094 2262-2271 2276-2286 2446-2719 2915-3443 3597-3616 3620-3623 3631-3636 3642-3662 3670-3674 3687-3691 3722-3832 3884-4040 4045-4048 4055-4198
R/autoClean.R 89% 152-153 248-254 397-398 403 413-417
R/autoFilter.R 57% 31-228 403-406 412 414 429 439 491-504 532 623-626
R/CensoredDataSuite.R 97% 126-127 143 311 642-643 648 651
R/CriteriaComparison.R 87% 173-177 182 191-193 240-265
R/CriteriaMethods.R 15% 227-238 242-244 261-263 268-270 275 287-300 308-335 509-513 529-533 639-965 983-1162 1167-1168 1196-1245 1279-1839 1857-2173
R/DataDiscoveryRetrieval.R 32% 199 210-213 230-233 246-249 255 259 276-751 765-767 775 777 782-789 797 803 805 809 811 817 821 823 833 835 839 845 847 851 853 858 860 864 871-878 886 898-916 927-933 962-980 994-1012 1033 1130-1161 1266-1273 1371-1407 1500-1503 1572-1750
R/DepthProfile.R 0% 102-2033
R/Figures.R 0% 64-1524
R/GeospatialFunctions.R 50% 66-70 198-202 278-280 308-310 334-336 488 567-572 576 634-636 642-645 712-716 727-732 738-743 749-754 761-765 812-813 820-825 829 837-1007 1149-1155 1162-1444 1548-1551 1556-1579 1624-1627 1694-1702 1826-1829 1874-1878 1931-1962 2177-2187 2234-2244 2279-2281 2347 2351 2380-2382 2386 2390-2415 2507-2595 2743-2772 2899 2920-3504
R/GeospatialUtilities.R 74% 108 132 189 194 290-299 304-352 357-381 470 499-510 517-528 567-577 658-687 692 701-703 710-724 747-750 801 872-878 885 913-928 1042-1048 1106 1276 1310-1319 1331-1334 1446-1448 1453-1460 1498-1500 1545-1547 1597-1599 1651-1656 1739-1748 1808-1810 1846
R/MaintenanceScheduled.R 0% 42-474
R/Maps.R 80% 128-129 131 138 182-189 298-302 382-395 416-418 472-592 752
R/RequiredCols.R 30% 405-648
R/ResultFlagsDependent.R 55% 60-62 67 110-119 125-129 144-151 254 291-295 317-320 327-330 346-362 423 446-448 454-455 461 509-520 526-533 596-599 611 623-634 656-658 671-677 748-875 972-975 994 1012-1018 1027 1047-1061 1149-1157 1164-1171 1181-1183
R/ResultFlagsIndependent.R 70% 70-72 78 115-119 129-157 265-267 272 276 280 290 388-391 403-435 525-527 532-534 543 671-681 696-721 810-812 817-819 828 956-966 981-1168 1213 1235-1254 1267-1272 1412 1416 1474-1489 1498-1505 1569-1570 1665-1681 1753-1758 1879-1893
R/Tables.R 86% 18-29 110-117 125-127
R/TADAGeospatialRefLayers.R 0% 8-13
R/TADARefTables.R 91% 75-78 207-214 322-324 386-399 410 882-894 955 965-967 972-974 997-1013 1027 1157-1161 1373-1381
R/Transformations.R 60% 71-72 77-79 110 139 153 176-178 196-198 271-280 302 307 449-450 458-461 466-469 474-477 482-485 499-502 569 683-873 984-985 1007-1009 1040-1051 1056-1080 1084-1092
R/UnitConversions.R 82% 147 421 428 435 442-444 451 458-460 469-472 482-484 634-716 738-784 807 855 868-882 1115-1119 1199 1276-1279 1321
R/Utilities.R 64% 511 629-630 634 639-641 736 748-777 865-876 1020-1022 1090-1091 1145-1149 1259-1260 1264-1265 1275-1279 1284-1289 1331-1456 1597 1664 1670-1690 1716-1717 1730-1733 1829-1832 1859-2174 2201-2205 2214-2218 2435 2488 2494-2497 2501 2512 2531-2532 2534-2549 2551 2553 2555-2556 2558-2559 2561-2564 2566 2568 2571 2586 2592 2600 2605 2613-2618 2623-2628 2647 2653
R/WQPWQXATTAINSCSTRefs.R 67% 33 43 102 118 124 166 168-172 174 176-178 180 192 201-202 204 207-208 210 213 219-257 270-275 289-295 297 317-391 417-420 425 431 436 443 452-454 505-516 539 554 556 559-563 580 587-590 617-621 696-700 746 769-789 1175-1178 1189 1208-1210 1230 1260-1302 1325-1329 1352-1361 1374 1437 1448 1477-1490 1517 1540-1549 1574 1601-1610 1632-1639 1660-1669 1688 1691-1695 1714 1729-1738 2066-2070 2093-2102 2149 2178-2181 2183-2219 2223 2232 2238 2252 2254 2265 2270-2271 2273 2292 2295 2313 2318-2331 2344-2353 2397-2403 2408-2424 2437-2660 2692 2706 2743 2748 2764-2831 2842 2850-2853 2874 2888-2914 2930 2966 2970 2974 2980-2990 2995-3000 3028 3031 3039 3046 3059 3064 3090 3149 3200 3233 3251

Minimum allowed coverage is 10%

Generated by 🐒 cobertura-action against 90cd35c

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