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Dm lgg xcell #294

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Dm lgg xcell #294

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:sparkles: lgg xcell docker init
dmiller15 Dec 9, 2025
11c45fc
:bug: labels after from
dmiller15 Dec 9, 2025
d4e7101
:wrench: remove R script
dmiller15 Dec 10, 2025
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9 changes: 9 additions & 0 deletions lgg_xcell/0.1.0/Dockerfile
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FROM rocker/tidyverse:4.3.3
LABEL maintainer="Daniel Miller (millerd15@chop.edu)"
LABEL descrption="Docker for running lgg xcell analyses from https://github.com/d3b-center/radiomics_imaging_analyses/tree/main/lgg_xcell_analyses on CAVATICA"

RUN install2.r optparse R.utils caret glmnet

RUN R -e 'remotes::install_github("igordot/msigdbr", ref = "v25.1.1")'

COPY Dockerfile .